Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58743443 . G A CCDS10801.1:NM_002080.2:c.1048Cgc>Tgc_NP_002071.2:p.350R>C Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 ARG A:321 A:350 28.0 0.124 H -63.8 -39.4 28.0 0.124 0.0
ARG B:321 B:350 30.0 0.133 H -68.5 -43.7 NA NA NA
ARG C:321 C:350 31.0 0.138 H -63.5 -41.3 31.0 0.138 0.0
ARG D:321 D:350 40.0 0.178 H -63.9 -33.2 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 ARG A:321 A:350 28.0 0.124 H -64.4 -46.6 28.0 0.124 0.0 GOL
HOH
 3.787
3.467
 CD
NH2
 O3
O
ARG B:321 B:350 27.0 0.12 H -65.5 -40.7 27.0 0.12 0.0 GOL
HOH
 3.930
3.581
 CD
CD
 C3
O
ARG C:321 C:350 26.0 0.116 H -47.9 -55.9 NA NA NA
ARG D:321 D:350 28.0 0.124 H -60.3 -26.6 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:321 A:350 27.0 0.12 H -65.0 -40.1 27.0 0.12 0.0 GOL
HOH
 4.251
3.617
 CD
CD
 O1
O
ARG C:321 C:350 30.0 0.133 H -69.9 -39.1 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:321 B:350 31.0 0.138 H -46.6 -41.4 31.0 0.138 0.0 GOL
HOH
 3.726
3.529
 CD
CD
 O1
O
ARG D:321 D:350 31.0 0.138 H -69.4 -47.0 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:321 A:350 27.0 0.12 H -56.7 -44.6 27.0 0.12 0.0 BME
HOH
 4.899
3.538
 CD
CB
 S2
O
ARG C:321 C:350 27.0 0.12 H -66.6 -42.5 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:321 B:350 26.0 0.116 H -52.6 -39.0 26.0 0.116 0.0 BME
HOH
 4.775
3.754
 CD
CD
 S2
O
ARG D:321 D:350 29.0 0.129 H -63.2 -46.8 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:321 A:329 25.0 0.111 H -66.6 -38.8 25.0 0.111 0.0 HOH
 3.447
 NH2
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 ARG A:321 A:321 27.0 0.12 H -61.2 -40.6 27.0 0.12 0.0 HOH
 3.491
 NH2
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:321 A:329 27.0 0.12 H -59.3 -41.1 27.0 0.12 0.0 HOH
 3.750
 NH2
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:321 A:329 27.0 0.12 H -63.7 -42.4 27.0 0.12 0.0 HOH
 3.716
 CG
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:321 A:329 28.0 0.124 H -63.8 -40.3 28.0 0.124 0.0 HOH
 3.071
 CG
 O
ARG B:321 B:329 28.0 0.124 H -56.6 -44.8 28.0 0.124 0.0 HOH
 3.700
 NH2
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:321 A:329 25.0 0.111 H -58.1 -42.0 25.0 0.111 0.0 HOH
 3.358
 NH2
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:321 A:329 29.0 0.129 H -63.3 -42.3 29.0 0.129 0.0 HOH
 3.223
 NH2
 O
ARG B:321 B:329 26.0 0.116 H -54.1 -42.4 26.0 0.116 0.0 HOH
 3.314
 NH2
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:321 A:329 24.0 0.107 H -52.0 -40.2 24.0 0.107 0.0
ARG B:321 B:329 26.0 0.116 H -65.7 -46.6 26.0 0.116 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:321 A:329 25.0 0.111 H -47.0 -57.8 25.0 0.111 0.0
ARG B:321 B:329 28.0 0.124 H -59.0 -58.2 28.0 0.124 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:321 A:329 27.0 0.12 H -61.3 -43.4 27.0 0.12 0.0 HOH
 3.224
 N
 O
ARG B:321 B:329 27.0 0.12 H -61.9 -42.5 27.0 0.12 0.0 HOH
 3.319
 NH2
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:321 A:329 30.0 0.133 H -59.0 -48.6 30.0 0.133 0.0 HOH
 3.599
 NH2
 O
ARG B:321 B:329 27.0 0.12 H -64.5 -35.3 27.0 0.12 0.0 HOH
 3.445
 NH2
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:321 A:329 29.0 0.129 H -62.7 -41.5 29.0 0.129 0.0 HOH
 3.384
 NH2
 O
ARG B:321 B:329 28.0 0.124 H -66.8 -34.8 28.0 0.124 0.0 HOH
 3.220
 CD
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:321 A:329 29.0 0.129 H -60.6 -44.2 29.0 0.129 0.0 HOH
 3.369
 N
 O
ARG B:321 B:329 27.0 0.12 H -61.0 -46.5 27.0 0.12 0.0 HOH
 3.295
 CB
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:321 A:329 25.0 0.111 H -59.2 -40.9 25.0 0.111 0.0 HOH
 3.338
 NH2
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:321 A:329 24.0 0.107 H -55.2 -45.8 24.0 0.107 0.0 HOH
 3.664
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 ARG A:350 A:350 31.0 0.138 H -61.7 -47.6