Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58743454 . A C CCDS10801.1:NM_002080.2:c.1037gTc>gGc_NP_002071.2:p.346V>G Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 GLY A:317 A:346 47.0 0.627 H -65.6 -42.3 47.0 0.627 0.0
GLY B:317 B:346 44.0 0.587 H -64.2 -44.8 NA NA NA
GLY C:317 C:346 46.0 0.613 H -61.0 -41.6 46.0 0.613 0.0
GLY D:317 D:346 45.0 0.6 H -62.9 -50.2 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 GLY A:317 A:346 38.0 0.507 H -56.2 -50.0 38.0 0.507 0.0 GOL
HOH
 2.974
2.686
 C
O
 O1
O
GLY B:317 B:346 37.0 0.493 H -68.0 -36.3 37.0 0.493 0.0 GOL
HOH
 3.278
6.392
 C
N
 O1
O
GLY C:317 C:346 44.0 0.587 H -102.3 15.8 NA NA NA
GLY D:317 D:346 46.0 0.613 H -73.9 9.0 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY A:317 A:346 40.0 0.533 H -61.4 -37.0 40.0 0.533 0.0 GOL
HOH
 3.606
2.566
 C
O
 C3
O
GLY C:317 C:346 42.0 0.56 H -55.3 -47.2 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY B:317 B:346 39.0 0.52 H -58.2 -43.4 39.0 0.52 0.0 GOL
HOH
 3.079
3.538
 C
CA
 O3
O
GLY D:317 D:346 38.0 0.507 H -53.0 -65.4 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY A:317 A:346 40.0 0.533 H -57.1 -49.2 40.0 0.533 0.0 BME
HOH
 3.364
2.899
 CA
O
 O1
O
GLY C:317 C:346 39.0 0.52 H -54.7 -50.6 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY B:317 B:346 39.0 0.52 H -63.8 -32.8 39.0 0.52 0.0 BME
HOH
 3.503
6.513
 O
N
 C2
O
GLY D:317 D:346 39.0 0.52 H -53.4 -49.8 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:317 A:325 34.0 0.453 H -58.7 -40.6 34.0 0.453 0.0 HOH
 2.589
 O
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 GLY A:317 A:317 39.0 0.52 H -62.8 -40.5 39.0 0.52 0.0 HOH
 3.593
 N
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:317 A:325 36.0 0.48 H -58.7 -38.9 36.0 0.48 0.0 HOH
 4.278
 CA
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:317 A:325 40.0 0.533 H -51.2 -43.3 40.0 0.533 0.0 HOH
 4.327
 CA
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 GLY A:317 A:325 38.0 0.507 H -56.9 -47.8 38.0 0.507 0.0 HOH
 2.656
 O
 O
GLY B:317 B:325 41.0 0.547 H -55.9 -42.2 41.0 0.547 0.0 HOH
 2.891
 O
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 GLY A:317 A:325 34.0 0.453 H -62.4 -38.4 34.0 0.453 0.0 HOH
 3.624
 N
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:317 A:325 40.0 0.533 H -65.0 -33.6 40.0 0.533 0.0 HOH
 4.066
 CA
 O
GLY B:317 B:325 40.0 0.533 H -49.3 -40.1 40.0 0.533 0.0 HOH
 6.856
 O
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:317 A:325 40.0 0.533 H -56.8 -39.7 40.0 0.533 0.0
GLY B:317 B:325 35.0 0.467 H -57.7 -42.3 35.0 0.467 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:317 A:325 38.0 0.507 H -58.4 -33.1 38.0 0.507 0.0
GLY B:317 B:325 34.0 0.453 H -67.7 -39.1 34.0 0.453 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:317 A:325 40.0 0.533 H -58.2 -42.2 40.0 0.533 0.0 HOH
 2.575
 O
 O
GLY B:317 B:325 40.0 0.533 H -59.5 -38.4 40.0 0.533 0.0 HOH
 2.875
 O
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:317 A:325 40.0 0.533 H -61.7 -45.0 40.0 0.533 0.0 HOH
 3.637
 CA
 O
GLY B:317 B:325 40.0 0.533 H -59.0 -38.9 40.0 0.533 0.0 HOH
 2.754
 O
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:317 A:325 38.0 0.507 H -62.2 -41.9 38.0 0.507 0.0 HOH
 2.756
 O
 O
GLY B:317 B:325 41.0 0.547 H -59.0 -42.7 41.0 0.547 0.0 HOH
 2.824
 O
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:317 A:325 38.0 0.507 H -57.3 -46.8 38.0 0.507 0.0 HOH
 2.792
 O
 O
GLY B:317 B:325 43.0 0.573 H -59.4 -44.0 43.0 0.573 0.0 HOH
 2.602
 O
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:317 A:325 39.0 0.52 H -60.4 -38.6 39.0 0.52 0.0 HOH
 4.061
 CA
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:317 A:325 37.0 0.493 H -48.3 -48.3 37.0 0.493 0.0 HOH
 4.043
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 VAL A:346 A:346 88.0 0.568 H -58.9 -42.1