Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58750617 . C A CCDS10801.1:NM_002080.2:c.803gGc>gTc_NP_002071.2:p.268G>V Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 GLY A:239 A:268 44.0 0.587 T 98.5 7.6 44.0 0.587 0.0
GLY B:239 B:268 24.0 0.32 T 103.6 8.3 NA NA NA
GLY C:239 C:268 49.0 0.653 T 100.7 7.6 49.0 0.653 0.0
GLY D:239 D:268 41.0 0.547 T 103.2 7.9 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 GLY A:239 A:268 52.0 0.693 T 82.2 37.2 52.0 0.693 0.0 HOH
 3.012
 CA
 O
GLY B:239 B:268 39.0 0.52 T 90.6 16.6 39.0 0.52 0.0 HOH
 3.363
 C
 O
GLY C:239 C:268 54.0 0.72 T 91.6 23.5 NA NA NA
GLY D:239 D:268 56.0 0.747 T 111.0 11.1 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY A:239 A:268 53.0 0.707 T 94.8 6.0 53.0 0.707 0.0 GOL
HOH
 6.033
2.526
 O
O
 O1
O
GLY C:239 C:268 54.0 0.72 T 101.6 14.7 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY B:239 B:268 54.0 0.72 T 82.8 19.3 54.0 0.72 0.0 GOL
HOH
 6.951
3.479
 O
C
 O3
O
GLY D:239 D:268 53.0 0.707 T 81.0 16.2 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY A:239 A:268 55.0 0.733 T 86.9 19.7 55.0 0.733 0.0 HOH
 2.968
 O
 O
GLY C:239 C:268 56.0 0.747 T 84.9 15.7 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 GLY B:239 B:268 51.0 0.68 T 87.8 19.7 51.0 0.68 0.0 HOH
 3.450
 C
 O
GLY D:239 D:268 52.0 0.693 T 94.1 10.8 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:239 A:247 40.0 0.533 T 99.2 9.4 40.0 0.533 0.0 HOH
 3.531
 C
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 GLY A:239 A:239 38.0 0.507 T 99.8 18.8 38.0 0.507 0.0 HOH
 3.316
 C
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:239 A:247 41.0 0.547 T 97.6 18.7 41.0 0.547 0.0 HOH
 3.570
 C
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:239 A:247 41.0 0.547 T 100.7 10.6 41.0 0.547 0.0 HOH
 3.502
 C
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 GLY A:239 A:247 51.0 0.68 T 81.4 18.3 38.0 0.507 0.173 B:P00508:0.173
 HOH
 3.525
 CA
 O
GLY B:239 B:247 53.0 0.707 T 84.0 22.3 45.0 0.6 0.107 A:P00508:0.107
 HOH
 3.369
 CA
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 GLY A:239 A:247 39.0 0.52 T 95.5 12.4 39.0 0.52 0.0 HOH
 3.460
 C
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:239 A:247 54.0 0.72 T 74.7 17.0 49.0 0.653 0.067 B:P00508:0.067
 HOH
 4.157
 O
 O
GLY B:239 B:247 51.0 0.68 T 79.1 21.8 48.0 0.64 0.04 A:P00508:0.04
 HOH
 3.720
 C
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:239 A:247 49.0 0.653 T 68.4 51.3 49.0 0.653 0.0
GLY B:239 B:247 50.0 0.667 T 105.2 2.1 50.0 0.667 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 GLY A:239 A:247 39.0 0.52 T 83.6 8.7 39.0 0.52 0.0
GLY B:239 B:247 46.0 0.613 T 91.4 26.4 46.0 0.613 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:239 A:247 53.0 0.707 T 87.4 21.0 42.0 0.56 0.147 B:P00508:0.147
 HOH
 3.470
 CA
 O
GLY B:239 B:247 48.0 0.64 T 83.3 28.1 44.0 0.587 0.053 A:P00508:0.053
 HOH
 3.522
 CA
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:239 A:247 53.0 0.707 T 89.9 19.2 42.0 0.56 0.147 B:P00508:0.147
 HOH
 3.601
 CA
 O
GLY B:239 B:247 52.0 0.693 T 86.6 23.5 47.0 0.627 0.066 A:P00508:0.067
 HOH
 3.673
 CA
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 GLY A:239 A:247 52.0 0.693 T 91.4 17.5 43.0 0.573 0.12 B:P00508:0.12
 HOH
 3.604
 CA
 O
GLY B:239 B:247 54.0 0.72 T 87.0 17.9 45.0 0.6 0.12 A:P00508:0.12
 HOH
 3.593
 CA
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:239 A:247 51.0 0.68 T 91.2 19.6 41.0 0.547 0.133 B:P00508:0.133
 HOH
 3.554
 CA
 O
GLY B:239 B:247 52.0 0.693 T 80.4 31.7 45.0 0.6 0.093 A:P00508:0.093
 HOH
 3.601
 CA
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:239 A:247 41.0 0.547 T 96.6 14.2 41.0 0.547 0.0 HOH
 3.453
 C
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 GLY A:239 A:247 40.0 0.533 T 92.5 22.5 40.0 0.533 0.0 HOH
 3.615
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 GLY A:268 A:268 54.0 0.72 T 80.4 18.1