Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 58750624 | . | C | A | CCDS10801.1:NM_002080.2:c.796Gaa>Taa_NP_002071.2:p.266E>* | Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5ax8 | 1 | P00505 | 99.75 | 0.0 |
X-RAY |
2016-03-16 | GLU | A:237 | A:266 | 155.0 | 0.816 | H | -61.2 | -32.5 | 155.0 | 0.816 | 0.0 | ||||||
GLU | B:237 | B:266 | 147.0 | 0.774 | H | -66.7 | -38.4 | NA | NA | NA | |||||||||||||
GLU | C:237 | C:266 | 138.0 | 0.726 | H | -69.4 | -26.7 | 138.0 | 0.726 | 0.0 | |||||||||||||
GLU | D:237 | D:266 | 138.0 | 0.726 | H | -76.3 | -19.2 | NA | NA | NA | |||||||||||||
3hlm | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-06-02 | GLU | A:237 | A:266 | 130.0 | 0.684 | H | -70.7 | -34.0 | 130.0 | 0.684 | 0.0 |
HOH |
2.828 |
OE1 |
O |
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GLU | B:237 | B:266 | 138.0 | 0.726 | H | -58.6 | -37.1 | 138.0 | 0.726 | 0.0 |
HOH |
2.553 |
OE1 |
O |
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GLU | C:237 | C:266 | 134.0 | 0.705 | H | -49.9 | -21.1 | NA | NA | NA | |||||||||||||
GLU | D:237 | D:266 | 147.0 | 0.774 | H | -42.1 | -33.6 | NA | NA | NA | |||||||||||||
3pd6 | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLU | A:237 | A:266 | 136.0 | 0.716 | H | -60.7 | -28.7 | 136.0 | 0.716 | 0.0 |
HOH |
2.758 |
OE1 |
O |
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GLU | C:237 | C:266 | 130.0 | 0.684 | H | -62.0 | -18.6 | NA | NA | NA | |||||||||||||
3pd6 | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLU | B:237 | B:266 | 128.0 | 0.674 | H | -63.0 | -25.9 | 128.0 | 0.674 | 0.0 |
HOH |
3.796 |
N |
O |
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GLU | D:237 | D:266 | 142.0 | 0.747 | H | -61.8 | -30.6 | NA | NA | NA | |||||||||||||
3pdb | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLU | A:237 | A:266 | 130.0 | 0.684 | H | -55.4 | -32.9 | 130.0 | 0.684 | 0.0 |
HOH |
2.589 |
OE1 |
O |
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GLU | C:237 | C:266 | 128.0 | 0.674 | H | -51.2 | -28.1 | NA | NA | NA | |||||||||||||
3pdb | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLU | B:237 | B:266 | 136.0 | 0.716 | H | -62.0 | -33.5 | 136.0 | 0.716 | 0.0 |
HOH |
3.441 |
O |
O |
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GLU | D:237 | D:266 | 128.0 | 0.674 | H | -66.6 | -19.1 | NA | NA | NA | |||||||||||||
1ama | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | GLU | A:237 | A:245 | 138.0 | 0.726 | H | -77.2 | -13.7 | 138.0 | 0.726 | 0.0 |
HOH |
3.024 |
OE2 |
O |
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1ivr | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1997-07-23 | GLU | A:237 | A:237 | 138.0 | 0.726 | H | -69.8 | -16.7 | 138.0 | 0.726 | 0.0 |
HOH |
2.179 |
OE1 |
O |
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1map | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | GLU | A:237 | A:245 | 154.0 | 0.811 | H | -79.7 | -4.1 | 154.0 | 0.811 | 0.0 |
HOH |
3.035 |
OE2 |
O |
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1maq | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | GLU | A:237 | A:245 | 145.0 | 0.763 | H | -75.4 | -14.1 | 145.0 | 0.763 | 0.0 |
HOH |
2.716 |
OE2 |
O |
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1oxo | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | GLU | A:237 | A:245 | 144.0 | 0.758 | H | -70.5 | -35.4 | 144.0 | 0.758 | 0.0 |
HOH |
3.225 |
OE2 |
O |
||
GLU | B:237 | B:245 | 148.0 | 0.779 | H | -66.1 | -36.6 | 148.0 | 0.779 | 0.0 |
HOH |
2.688 |
OE1 |
O |
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1oxp | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | GLU | A:237 | A:245 | 150.0 | 0.789 | T | -75.4 | -7.3 | 150.0 | 0.789 | 0.0 |
HOH |
3.412 |
OE2 |
O |
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1tar | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | GLU | A:237 | A:245 | 154.0 | 0.811 | H | -45.2 | -38.1 | 154.0 | 0.811 | 0.0 |
HOH |
6.289 |
N |
O |
||
GLU | B:237 | B:245 | 134.0 | 0.705 | H | -55.3 | -23.9 | 134.0 | 0.705 | 0.0 |
HOH |
4.912 |
OE1 |
O |
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1tas | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | GLU | A:237 | A:245 | 137.0 | 0.721 | H | -55.7 | -42.3 | 137.0 | 0.721 | 0.0 | ||||||
GLU | B:237 | B:245 | 140.0 | 0.737 | H | -59.0 | -28.1 | 140.0 | 0.737 | 0.0 | |||||||||||||
1tat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | GLU | A:237 | A:245 | 148.0 | 0.779 | H | -65.7 | -23.9 | 148.0 | 0.779 | 0.0 | ||||||
GLU | B:237 | B:245 | 150.0 | 0.789 | H | -65.1 | -16.7 | 150.0 | 0.789 | 0.0 | |||||||||||||
7aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | GLU | A:237 | A:245 | 148.0 | 0.779 | H | -64.6 | -32.1 | 148.0 | 0.779 | 0.0 |
HOH |
2.789 |
OE2 |
O |
||
GLU | B:237 | B:245 | 144.0 | 0.758 | H | -66.3 | -30.6 | 144.0 | 0.758 | 0.0 |
HOH |
2.687 |
OE2 |
O |
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8aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | GLU | A:237 | A:245 | 145.0 | 0.763 | H | -73.0 | -32.6 | 145.0 | 0.763 | 0.0 |
HOH |
2.999 |
OE2 |
O |
||
GLU | B:237 | B:245 | 149.0 | 0.784 | H | -73.0 | -23.8 | 149.0 | 0.784 | 0.0 |
HOH |
3.072 |
OE2 |
O |
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9aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | GLU | A:237 | A:245 | 148.0 | 0.779 | H | -65.1 | -37.6 | 148.0 | 0.779 | 0.0 |
HOH |
2.975 |
OE2 |
O |
||
GLU | B:237 | B:245 | 140.0 | 0.737 | H | -69.9 | -19.0 | 140.0 | 0.737 | 0.0 |
HOH |
2.495 |
OE2 |
O |
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1aka | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | GLU | A:237 | A:245 | 148.0 | 0.779 | H | -66.7 | -38.0 | 148.0 | 0.779 | 0.0 |
HOH |
2.763 |
OE2 |
O |
||
GLU | B:237 | B:245 | 146.0 | 0.768 | H | -64.0 | -30.9 | 146.0 | 0.768 | 0.0 |
HOH |
2.567 |
OE2 |
O |
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1akb | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | GLU | A:237 | A:245 | 148.0 | 0.779 | H | -77.1 | -11.9 | 148.0 | 0.779 | 0.0 |
HOH |
2.801 |
OE2 |
O |
||
1akc | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | GLU | A:237 | A:245 | 150.0 | 0.789 | H | -63.5 | -30.8 | 150.0 | 0.789 | 0.0 |
HOH |
3.054 |
OE1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00505-f1 | 1 | P00505 | 100.0 | 0.0 | GLU | A:266 | A:266 | 139.0 | 0.732 | H | -60.4 | -33.8 |