Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58750636 . G A CCDS10801.1:NM_002080.2:c.784Cgc>Tgc_NP_002071.2:p.262R>C Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 ARG A:233 A:262 58.0 0.258 H -65.4 -36.3 58.0 0.258 0.0
ARG B:233 B:262 47.0 0.209 H -61.5 -34.5 NA NA NA
ARG C:233 C:262 46.0 0.204 H -62.5 -34.7 46.0 0.204 0.0
ARG D:233 D:262 48.0 0.213 H -60.7 -36.1 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 ARG A:233 A:262 39.0 0.173 H -54.7 -44.5 39.0 0.173 0.0 HOH
 2.612
 O
 O
ARG B:233 B:262 46.0 0.204 H -61.8 -35.6 46.0 0.204 0.0 HOH
 2.728
 O
 O
ARG C:233 C:262 35.0 0.156 H -55.2 -45.6 NA NA NA
ARG D:233 D:262 35.0 0.156 H -64.3 -37.8 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:233 A:262 42.0 0.187 H -62.6 -44.0 42.0 0.187 0.0 HOH
 2.816
 O
 O
ARG C:233 C:262 44.0 0.196 H -71.0 -32.7 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:233 B:262 42.0 0.187 H -58.7 -34.8 42.0 0.187 0.0 HOH
 2.702
 O
 O
ARG D:233 D:262 40.0 0.178 H -62.2 -32.1 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:233 A:262 42.0 0.187 H -60.5 -37.4 42.0 0.187 0.0 GOL
HOH
 2.697
2.732
 NH2
O
 O3
O
ARG C:233 C:262 43.0 0.191 H -68.4 -24.2 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:233 B:262 43.0 0.191 H -58.5 -39.3 43.0 0.191 0.0 HOH
 2.671
 O
 O
ARG D:233 D:262 42.0 0.187 H -65.1 -31.0 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:233 A:241 43.0 0.191 H -71.3 -34.8 43.0 0.191 0.0 HOH
 3.345
 NH1
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 ARG A:233 A:233 51.0 0.227 H -69.5 -29.1 51.0 0.227 0.0 HOH
 2.181
 O
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:233 A:241 51.0 0.227 H -65.9 -39.2 51.0 0.227 0.0 HOH
 3.067
 NH2
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:233 A:241 49.0 0.218 H -66.9 -34.9 49.0 0.218 0.0 HOH
 3.541
 NH2
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:233 A:241 51.0 0.227 H -73.6 -30.6 51.0 0.227 0.0 HOH
 3.187
 O
 O
ARG B:233 B:241 51.0 0.227 H -60.8 -29.8 51.0 0.227 0.0 HOH
 3.137
 O
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:233 A:241 43.0 0.191 H -61.7 -34.7 43.0 0.191 0.0 HOH
 2.984
 NH1
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:233 A:241 47.0 0.209 H -63.6 -52.3 47.0 0.209 0.0 HOH
 4.305
 CG
 O
ARG B:233 B:241 56.0 0.249 H -61.9 -48.6 56.0 0.249 0.0 HOH
 3.271
 CB
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:233 A:241 49.0 0.218 H -49.9 -42.0 49.0 0.218 0.0
ARG B:233 B:241 51.0 0.227 H -69.1 -36.6 51.0 0.227 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:233 A:241 49.0 0.218 H -52.4 -34.2 49.0 0.218 0.0
ARG B:233 B:241 47.0 0.209 H -68.0 -31.6 47.0 0.209 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:233 A:241 50.0 0.222 H -61.9 -40.5 50.0 0.222 0.0 HOH
 2.957
 NH1
 O
ARG B:233 B:241 49.0 0.218 H -62.8 -32.6 49.0 0.218 0.0 HOH
 2.824
 O
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:233 A:241 53.0 0.236 H -63.2 -38.5 53.0 0.236 0.0 HOH
 3.302
 O
 O
ARG B:233 B:241 50.0 0.222 H -57.0 -35.5 50.0 0.222 0.0 HOH
 2.912
 O
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:233 A:241 58.0 0.258 H -63.0 -33.3 58.0 0.258 0.0 HOH
 3.211
 O
 O
ARG B:233 B:241 48.0 0.213 H -60.2 -32.1 48.0 0.213 0.0 HOH
 3.009
 O
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:233 A:241 55.0 0.244 H -61.3 -37.5 55.0 0.244 0.0 HOH
 2.964
 NH1
 O
ARG B:233 B:241 50.0 0.222 H -59.5 -37.7 50.0 0.222 0.0 HOH
 3.128
 O
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:233 A:241 48.0 0.213 H -70.3 -39.2 48.0 0.213 0.0 HOH
 3.616
 NH2
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:233 A:241 44.0 0.196 H -70.5 -35.9 44.0 0.196 0.0 HOH
 3.474
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 ARG A:262 A:262 41.0 0.182 H -64.0 -42.6