Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 58752439 | . | C | A | CCDS10801.1:NM_002080.2:c.589Gat>Tat_NP_002071.2:p.197D>Y | Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5ax8 | 1 | P00505 | 99.75 | 0.0 |
X-RAY |
2016-03-16 | ASP | A:168 | A:197 | 33.0 | 0.22 | H | -64.2 | -45.1 | 33.0 | 0.22 | 0.0 | ||||||
| ASP | B:168 | B:197 | 44.0 | 0.293 | H | -67.6 | -45.6 | NA | NA | NA | |||||||||||||
| ASP | C:168 | C:197 | 42.0 | 0.28 | H | -67.3 | -41.7 | 42.0 | 0.28 | 0.0 | |||||||||||||
| ASP | D:168 | D:197 | 24.0 | 0.16 | H | -63.5 | -47.1 | NA | NA | NA | |||||||||||||
| 3hlm | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-06-02 | ASP | A:168 | A:197 | 37.0 | 0.247 | H | -58.6 | -48.8 | 37.0 | 0.247 | 0.0 |
HOH |
2.999 |
O |
O |
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| ASP | B:168 | B:197 | 36.0 | 0.24 | H | -59.8 | -50.5 | 36.0 | 0.24 | 0.0 |
HOH |
2.740 |
O |
O |
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| ASP | C:168 | C:197 | 40.0 | 0.267 | H | -56.9 | -48.0 | NA | NA | NA | |||||||||||||
| ASP | D:168 | D:197 | 31.0 | 0.207 | H | -52.5 | -46.4 | NA | NA | NA | |||||||||||||
| 3pd6 | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ASP | A:168 | A:197 | 40.0 | 0.267 | H | -59.1 | -47.0 | 40.0 | 0.267 | 0.0 |
HOH |
2.758 |
O |
O |
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| ASP | C:168 | C:197 | 36.0 | 0.24 | H | -62.8 | -50.8 | NA | NA | NA | |||||||||||||
| 3pd6 | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ASP | B:168 | B:197 | 33.0 | 0.22 | H | -53.2 | -57.0 | 33.0 | 0.22 | 0.0 |
HOH |
2.774 |
O |
O |
||
| ASP | D:168 | D:197 | 37.0 | 0.247 | H | -63.4 | -50.8 | NA | NA | NA | |||||||||||||
| 3pdb | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ASP | A:168 | A:197 | 42.0 | 0.28 | H | -55.3 | -53.3 | 42.0 | 0.28 | 0.0 |
HOH |
2.619 |
OD1 |
O |
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| ASP | C:168 | C:197 | 34.0 | 0.227 | H | -62.8 | -44.6 | NA | NA | NA | |||||||||||||
| 3pdb | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ASP | B:168 | B:197 | 36.0 | 0.24 | H | -55.2 | -49.8 | 36.0 | 0.24 | 0.0 |
HOH |
4.090 |
CG |
O |
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| ASP | D:168 | D:197 | 39.0 | 0.26 | H | -66.3 | -44.7 | NA | NA | NA | |||||||||||||
| 1ama | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ASP | A:168 | A:176 | 29.0 | 0.193 | H | -62.6 | -46.8 | 29.0 | 0.193 | 0.0 |
HOH |
2.332 |
OD2 |
O |
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| 1ivr | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1997-07-23 | ASP | A:168 | A:168 | 29.0 | 0.193 | H | -57.5 | -52.1 | 29.0 | 0.193 | 0.0 |
HOH |
2.509 |
OD2 |
O |
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| 1map | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ASP | A:168 | A:176 | 29.0 | 0.193 | H | -52.5 | -53.0 | 29.0 | 0.193 | 0.0 |
HOH |
2.402 |
OD2 |
O |
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| 1maq | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ASP | A:168 | A:176 | 30.0 | 0.2 | H | -52.6 | -52.1 | 30.0 | 0.2 | 0.0 |
HOH |
2.469 |
OD2 |
O |
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| 1oxo | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | ASP | A:168 | A:176 | 37.0 | 0.247 | H | -65.9 | -53.6 | 37.0 | 0.247 | 0.0 |
HOH |
2.502 |
O |
O |
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| ASP | B:168 | B:176 | 41.0 | 0.273 | H | -66.9 | -47.6 | 41.0 | 0.273 | 0.0 |
HOH |
2.474 |
OD2 |
O |
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| 1oxp | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | ASP | A:168 | A:176 | 29.0 | 0.193 | H | -70.0 | -51.2 | 29.0 | 0.193 | 0.0 |
HOH |
3.009 |
OD2 |
O |
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| 1tar | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ASP | A:168 | A:176 | 42.0 | 0.28 | H | -70.9 | -41.2 | 42.0 | 0.28 | 0.0 |
HOH |
2.784 |
OD1 |
O |
||
| ASP | B:168 | B:176 | 42.0 | 0.28 | H | -59.6 | -51.7 | 42.0 | 0.28 | 0.0 |
HOH |
2.623 |
O |
O |
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| 1tas | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ASP | A:168 | A:176 | 25.0 | 0.167 | H | -46.8 | -57.1 | 25.0 | 0.167 | 0.0 | ||||||
| ASP | B:168 | B:176 | 27.0 | 0.18 | H | -50.0 | -61.7 | 27.0 | 0.18 | 0.0 | |||||||||||||
| 1tat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ASP | A:168 | A:176 | 31.0 | 0.207 | H | -56.3 | -50.6 | 31.0 | 0.207 | 0.0 | ||||||
| ASP | B:168 | B:176 | 30.0 | 0.2 | H | -48.9 | -64.3 | 30.0 | 0.2 | 0.0 | |||||||||||||
| 7aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ASP | A:168 | A:176 | 36.0 | 0.24 | H | -64.8 | -47.9 | 36.0 | 0.24 | 0.0 |
HOH |
2.580 |
O |
O |
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| ASP | B:168 | B:176 | 42.0 | 0.28 | H | -66.8 | -49.5 | 42.0 | 0.28 | 0.0 |
HOH |
2.656 |
OD2 |
O |
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| 8aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ASP | A:168 | A:176 | 37.0 | 0.247 | H | -63.6 | -50.7 | 37.0 | 0.247 | 0.0 |
HOH |
2.572 |
O |
O |
||
| ASP | B:168 | B:176 | 38.0 | 0.253 | H | -71.1 | -48.7 | 38.0 | 0.253 | 0.0 |
HOH |
2.833 |
O |
O |
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| 9aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ASP | A:168 | A:176 | 40.0 | 0.267 | H | -63.9 | -49.1 | 40.0 | 0.267 | 0.0 |
HOH |
2.461 |
O |
O |
||
| ASP | B:168 | B:176 | 41.0 | 0.273 | H | -68.3 | -47.1 | 41.0 | 0.273 | 0.0 |
HOH |
2.732 |
O |
O |
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| 1aka | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ASP | A:168 | A:176 | 35.0 | 0.233 | H | -65.0 | -49.9 | 35.0 | 0.233 | 0.0 |
HOH |
2.490 |
O |
O |
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| ASP | B:168 | B:176 | 41.0 | 0.273 | H | -68.5 | -41.6 | 41.0 | 0.273 | 0.0 |
HOH |
2.373 |
OD2 |
O |
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| 1akb | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ASP | A:168 | A:176 | 29.0 | 0.193 | H | -49.2 | -53.3 | 29.0 | 0.193 | 0.0 |
HOH |
2.518 |
OD2 |
O |
||
| 1akc | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ASP | A:168 | A:176 | 33.0 | 0.22 | H | -52.4 | -56.0 | 33.0 | 0.22 | 0.0 |
HOH |
2.445 |
OD2 |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p00505-f1 | 1 | P00505 | 100.0 | 0.0 | ASP | A:197 | A:197 | 37.0 | 0.247 | H | -63.1 | -49.3 | |