Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58752453 . G A CCDS10801.1:NM_002080.2:c.575aCa>aTa_NP_002071.2:p.192T>I Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 THR A:163 A:192 95.0 0.679 H -64.4 -41.9 95.0 0.679 0.0
THR B:163 B:192 101.0 0.721 H -68.7 -43.3 NA NA NA
THR C:163 C:192 91.0 0.65 H -64.2 -47.5 91.0 0.65 0.0
THR D:163 D:192 113.0 0.807 H -62.9 -43.3 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 SER A:163 A:192 89.0 0.774 H -66.5 -37.7 89.0 0.774 0.0 HOH
 2.525
 O
 O
SER B:163 B:192 87.0 0.757 H -76.9 -20.4 87.0 0.757 0.0 HOH
 3.240
 N
 O
SER C:163 C:192 86.0 0.748 H -72.1 -32.5 NA NA NA
SER D:163 D:192 87.0 0.757 H -59.9 -23.9 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 SER A:163 A:192 91.0 0.791 H -69.6 -43.4 91.0 0.791 0.0 HOH
 2.618
 OG
 O
SER C:163 C:192 84.0 0.73 H -76.5 -40.9 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 SER B:163 B:192 91.0 0.791 H -45.0 -47.8 91.0 0.791 0.0 HOH
 5.489
 C
 O
SER D:163 D:192 92.0 0.8 H -72.3 -35.4 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 SER A:163 A:192 91.0 0.791 H -75.7 -37.4 91.0 0.791 0.0 HOH
 2.534
 O
 O
SER C:163 C:192 87.0 0.757 H -79.1 -25.8 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 SER B:163 B:192 84.0 0.73 H -75.0 -41.2 84.0 0.73 0.0 HOH
 6.724
 CB
 O
SER D:163 D:192 87.0 0.757 H -72.5 -34.6 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 THR A:163 A:171 105.0 0.75 H -68.0 -32.0 105.0 0.75 0.0 HOH
 3.247
 OG1
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 THR A:163 A:163 108.0 0.771 H -52.7 -47.3 108.0 0.771 0.0 HOH
 3.871
 N
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 THR A:163 A:171 110.0 0.786 H -62.8 -45.0 110.0 0.786 0.0 HOH
 3.284
 N
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 THR A:163 A:171 104.0 0.743 H -62.4 -43.8 104.0 0.743 0.0 HOH
 3.285
 O
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 THR A:163 A:171 109.0 0.779 H -66.4 -45.2 109.0 0.779 0.0 HOH
 2.678
 O
 O
THR B:163 B:171 95.0 0.679 H -57.5 -52.9 95.0 0.679 0.0 HOH
 4.588
 CB
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 THR A:163 A:171 108.0 0.771 H -68.3 -35.3 108.0 0.771 0.0 HOH
 2.898
 O
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 THR A:163 A:171 103.0 0.736 H -51.5 -44.7 103.0 0.736 0.0 HOH
 2.747
 N
 O
THR B:163 B:171 95.0 0.679 H -60.9 -50.2 95.0 0.679 0.0 HOH
 8.593
 C
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 THR A:163 A:171 105.0 0.75 H -63.1 -61.6 105.0 0.75 0.0
THR B:163 B:171 108.0 0.771 H -60.7 -48.5 108.0 0.771 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 THR A:163 A:171 112.0 0.8 H -62.8 -57.7 112.0 0.8 0.0
THR B:163 B:171 107.0 0.764 H -53.1 -57.5 107.0 0.764 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 THR A:163 A:171 111.0 0.793 H -63.4 -47.3 111.0 0.793 0.0 HOH
 2.655
 O
 O
THR B:163 B:171 97.0 0.693 H -59.6 -47.4 97.0 0.693 0.0 HOH
 3.224
 N
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 THR A:163 A:171 109.0 0.779 H -64.9 -51.4 109.0 0.779 0.0 HOH
 2.828
 O
 O
THR B:163 B:171 99.0 0.707 H -59.0 -46.0 99.0 0.707 0.0 HOH
 2.988
 N
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 THR A:163 A:171 111.0 0.793 H -65.1 -47.1 111.0 0.793 0.0 HOH
 2.529
 O
 O
THR B:163 B:171 95.0 0.679 H -67.2 -46.3 95.0 0.679 0.0 HOH
 3.306
 OG1
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 THR A:163 A:171 109.0 0.779 H -63.6 -54.1 109.0 0.779 0.0 HOH
 3.002
 O
 O
THR B:163 B:171 96.0 0.686 H -58.5 -49.6 96.0 0.686 0.0 HOH
 3.090
 O
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 THR A:163 A:171 109.0 0.779 H -62.2 -47.2 109.0 0.779 0.0 HOH
 2.911
 O
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 THR A:163 A:171 99.0 0.707 H -54.1 -48.0 99.0 0.707 0.0 HOH
 2.639
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 THR A:192 A:192 107.0 0.764 H -62.5 -47.3