Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 58752466 | . | C | A | CCDS10801.1:NM_002080.2:c.562Ggt>Tgt_NP_002071.2:p.188G>C | Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5ax8 | 1 | P00505 | 99.75 | 0.0 |
X-RAY |
2016-03-16 | GLY | A:159 | A:188 | 19.0 | 0.253 | E | -145.1 | -168.7 | 19.0 | 0.253 | 0.0 | ||||||
| GLY | B:159 | B:188 | 17.0 | 0.227 | E | -145.4 | -163.7 | NA | NA | NA | |||||||||||||
| GLY | C:159 | C:188 | 15.0 | 0.2 | E | -147.3 | -162.1 | 15.0 | 0.2 | 0.0 | |||||||||||||
| GLY | D:159 | D:188 | 16.0 | 0.213 | E | -146.6 | -163.0 | NA | NA | NA | |||||||||||||
| 3hlm | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-06-02 | GLY | A:159 | A:188 | 19.0 | 0.253 | E | -133.1 | -162.6 | 19.0 | 0.253 | 0.0 |
HOH |
3.500 |
CA |
O |
||
| GLY | B:159 | B:188 | 17.0 | 0.227 | E | -127.4 | -156.4 | 17.0 | 0.227 | 0.0 |
HOH |
3.530 |
CA |
O |
|||||||||
| GLY | C:159 | C:188 | 18.0 | 0.24 | E | -133.8 | -162.8 | NA | NA | NA | |||||||||||||
| GLY | D:159 | D:188 | 12.0 | 0.16 | E | -147.5 | -178.1 | NA | NA | NA | |||||||||||||
| 3pd6 | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLY | A:159 | A:188 | 16.0 | 0.213 | E | -130.4 | -163.8 | 16.0 | 0.213 | 0.0 |
GOL HOH |
9.273 3.473 |
N CA |
O2 O |
||
| GLY | C:159 | C:188 | 19.0 | 0.253 | E | -126.8 | -164.0 | NA | NA | NA | |||||||||||||
| 3pd6 | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLY | B:159 | B:188 | 21.0 | 0.28 | E | -126.5 | -154.1 | 21.0 | 0.28 | 0.0 |
HOH |
4.119 |
C |
O |
||
| GLY | D:159 | D:188 | 18.0 | 0.24 | E | -150.1 | -172.0 | NA | NA | NA | |||||||||||||
| 3pdb | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLY | A:159 | A:188 | 17.0 | 0.227 | E | -120.9 | -161.9 | 17.0 | 0.227 | 0.0 |
HOH |
3.483 |
CA |
O |
||
| GLY | C:159 | C:188 | 18.0 | 0.24 | E | -128.7 | -151.5 | NA | NA | NA | |||||||||||||
| 3pdb | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | GLY | B:159 | B:188 | 20.0 | 0.267 | E | -140.6 | -162.1 | 20.0 | 0.267 | 0.0 |
HOH |
4.213 |
N |
O |
||
| GLY | D:159 | D:188 | 21.0 | 0.28 | E | -117.4 | -159.2 | NA | NA | NA | |||||||||||||
| 1ama | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | SER | A:159 | A:167 | 43.0 | 0.374 | E | -158.0 | 176.9 | 43.0 | 0.374 | 0.0 |
HOH |
2.814 |
OG |
O |
||
| 1ivr | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1997-07-23 | SER | A:159 | A:159 | 41.0 | 0.357 | E | -162.9 | -179.5 | 41.0 | 0.357 | 0.0 |
HOH |
2.977 |
OG |
O |
||
| 1map | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | SER | A:159 | A:167 | 47.0 | 0.409 | E | -157.3 | 177.2 | 47.0 | 0.409 | 0.0 |
HOH |
3.327 |
OG |
O |
||
| 1maq | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | SER | A:159 | A:167 | 44.0 | 0.383 | E | -151.7 | 179.0 | 44.0 | 0.383 | 0.0 |
HOH |
4.186 |
OG |
O |
||
| 1oxo | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | SER | A:159 | A:167 | 45.0 | 0.391 | E | -147.1 | -174.5 | 45.0 | 0.391 | 0.0 |
HOH |
3.094 |
CB |
O |
||
| SER | B:159 | B:167 | 46.0 | 0.4 | E | -141.5 | -169.1 | 46.0 | 0.4 | 0.0 |
HOH |
3.011 |
CB |
O |
|||||||||
| 1oxp | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | SER | A:159 | A:167 | 47.0 | 0.409 | E | -163.2 | -178.7 | 47.0 | 0.409 | 0.0 |
HOH |
3.200 |
OG |
O |
||
| 1tar | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | SER | A:159 | A:167 | 46.0 | 0.4 | E | -137.5 | -162.3 | 46.0 | 0.4 | 0.0 |
HOH |
3.215 |
CB |
O |
||
| SER | B:159 | B:167 | 51.0 | 0.443 | E | -137.2 | -168.4 | 51.0 | 0.443 | 0.0 |
HOH |
3.225 |
CB |
O |
|||||||||
| 1tas | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | SER | A:159 | A:167 | 48.0 | 0.417 | E | -156.4 | 167.3 | 48.0 | 0.417 | 0.0 | ||||||
| SER | B:159 | B:167 | 47.0 | 0.409 | E | -158.1 | -178.6 | 47.0 | 0.409 | 0.0 | |||||||||||||
| 1tat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | SER | A:159 | A:167 | 43.0 | 0.374 | E | -153.7 | 163.7 | 43.0 | 0.374 | 0.0 | ||||||
| SER | B:159 | B:167 | 46.0 | 0.4 | E | -154.5 | 167.4 | 46.0 | 0.4 | 0.0 | |||||||||||||
| 7aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | SER | A:159 | A:167 | 45.0 | 0.391 | E | -142.4 | -168.5 | 45.0 | 0.391 | 0.0 |
HOH |
3.034 |
OG |
O |
||
| SER | B:159 | B:167 | 46.0 | 0.4 | E | -135.1 | -165.8 | 46.0 | 0.4 | 0.0 |
HOH |
3.022 |
CB |
O |
|||||||||
| 8aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | SER | A:159 | A:167 | 47.0 | 0.409 | E | -141.9 | -169.5 | 47.0 | 0.409 | 0.0 |
HOH |
2.701 |
CB |
O |
||
| SER | B:159 | B:167 | 44.0 | 0.383 | E | -141.1 | -166.8 | 44.0 | 0.383 | 0.0 |
HOH |
3.070 |
CB |
O |
|||||||||
| 9aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | SER | A:159 | A:167 | 41.0 | 0.357 | E | -145.0 | -168.2 | 41.0 | 0.357 | 0.0 |
HOH |
2.881 |
CB |
O |
||
| SER | B:159 | B:167 | 47.0 | 0.409 | E | -136.6 | -171.1 | 47.0 | 0.409 | 0.0 |
HOH |
2.726 |
CB |
O |
|||||||||
| 1aka | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | SER | A:159 | A:167 | 45.0 | 0.391 | E | -146.0 | -170.3 | 45.0 | 0.391 | 0.0 |
HOH |
3.132 |
CB |
O |
||
| SER | B:159 | B:167 | 48.0 | 0.417 | E | -139.2 | -163.8 | 48.0 | 0.417 | 0.0 |
HOH |
2.952 |
CB |
O |
|||||||||
| 1akb | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | SER | A:159 | A:167 | 50.0 | 0.435 | E | -161.7 | 179.7 | 50.0 | 0.435 | 0.0 |
HOH |
3.339 |
OG |
O |
||
| 1akc | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | SER | A:159 | A:167 | 43.0 | 0.374 | E | -160.1 | 179.0 | 43.0 | 0.374 | 0.0 |
HOH |
3.997 |
OG |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p00505-f1 | 1 | P00505 | 100.0 | 0.0 | GLY | A:188 | A:188 | 20.0 | 0.267 | E | -120.2 | -160.6 | |