Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58756060 . A C CCDS10801.1:NM_002080.2:c.369agT>agG_NP_002071.2:p.123S>R Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 SER A:94 A:123 58.0 0.504 H -64.5 -35.7 58.0 0.504 0.0
SER B:94 B:123 66.0 0.574 H -89.6 -20.2 NA NA NA
SER C:94 C:123 66.0 0.574 H -85.0 -18.3 66.0 0.574 0.0
SER D:94 D:123 68.0 0.591 H -68.6 -20.4 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 SER A:94 A:123 63.0 0.548 H -80.4 -1.1 63.0 0.548 0.0 HOH
 3.123
 OG
 O
SER B:94 B:123 64.0 0.557 H -90.1 -10.4 64.0 0.557 0.0 HOH
 2.722
 O
 O
SER C:94 C:123 63.0 0.548 H -75.8 -9.0 NA NA NA
SER D:94 D:123 69.0 0.6 H -76.0 -20.2 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 SER A:94 A:123 63.0 0.548 H -77.0 -18.0 63.0 0.548 0.0 HOH
 3.310
 O
 O
SER C:94 C:123 64.0 0.557 H -74.9 -15.6 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 SER B:94 B:123 66.0 0.574 T -88.6 -8.3 66.0 0.574 0.0 HOH
 2.707
 O
 O
SER D:94 D:123 63.0 0.548 H -86.5 -14.0 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 SER A:94 A:123 62.0 0.539 H -79.8 -10.1 62.0 0.539 0.0 HOH
 5.378
 O
 O
SER C:94 C:123 65.0 0.565 H -82.1 -9.4 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 SER B:94 B:123 65.0 0.565 H -91.1 -9.0 65.0 0.565 0.0 HOH
 2.579
 O
 O
SER D:94 D:123 60.0 0.522 H -86.9 -6.2 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 SER A:94 A:97 48.0 0.417 T -89.2 -8.6 48.0 0.417 0.0 HOH
 5.156
 CB
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 SER A:94 A:94 51.0 0.443 H -91.7 -12.1 51.0 0.443 0.0 HOH
 5.130
 OG
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 SER A:94 A:97 51.0 0.443 H -75.0 -9.2 51.0 0.443 0.0 HOH
 5.505
 CB
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 SER A:94 A:97 55.0 0.478 H -75.8 -9.9 55.0 0.478 0.0 HOH
 5.223
 CB
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 SER A:94 A:97 51.0 0.443 T -84.9 -8.9 51.0 0.443 0.0 HOH
 3.287
 O
 O
SER B:94 B:97 60.0 0.522 T -79.2 -14.4 60.0 0.522 0.0 HOH
 5.304
 O
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 SER A:94 A:97 50.0 0.435 H -83.5 -18.1 50.0 0.435 0.0 HOH
 4.549
 OG
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 SER A:94 A:97 64.0 0.557 T -78.8 0.8 64.0 0.557 0.0 HOH
 6.186
 C
 O
SER B:94 B:97 54.0 0.47 T -67.2 -12.8 54.0 0.47 0.0 HOH
 3.487
 O
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 SER A:94 A:97 54.0 0.47 T -85.6 -14.5 54.0 0.47 0.0
SER B:94 B:97 54.0 0.47 T -83.2 3.2 54.0 0.47 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 SER A:94 A:97 56.0 0.487 H -81.1 -16.9 56.0 0.487 0.0
SER B:94 B:97 52.0 0.452 T -90.7 0.6 52.0 0.452 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 SER A:94 A:97 57.0 0.496 T -80.0 -8.8 57.0 0.496 0.0 HOH
 3.581
 C
 O
SER B:94 B:97 63.0 0.548 H -81.3 -16.7 63.0 0.548 0.0 HOH
 4.211
 N
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 SER A:94 A:97 57.0 0.496 T -77.1 -6.9 57.0 0.496 0.0 HOH
 3.293
 O
 O
SER B:94 B:97 59.0 0.513 H -79.1 -16.1 59.0 0.513 0.0 HOH
 4.111
 N
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 SER A:94 A:97 57.0 0.496 T -81.0 -6.5 57.0 0.496 0.0 HOH
 3.476
 O
 O
SER B:94 B:97 62.0 0.539 T -79.8 -12.4 62.0 0.539 0.0 HOH
 4.111
 N
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 SER A:94 A:97 57.0 0.496 T -83.7 -3.2 57.0 0.496 0.0 HOH
 3.269
 O
 O
SER B:94 B:97 58.0 0.504 H -77.5 -16.9 58.0 0.504 0.0 HOH
 3.748
 CB
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 SER A:94 A:97 50.0 0.435 H -81.2 -8.4 50.0 0.435 0.0 HOH
 5.461
 CB
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 SER A:94 A:97 49.0 0.426 H -78.6 -12.5 49.0 0.426 0.0 HOH
 4.830
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 SER A:123 A:123 52.0 0.452 H -81.7 -13.3