Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58757694 . G A CCDS10801.1:NM_002080.2:c.202Cgg>Tgg_NP_002071.2:p.68R>W Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 ARG A:39 A:68 56.0 0.249 B -133.0 144.3 37.0 0.164 0.085 C:P00505:0.084
ARG B:39 B:68 70.0 0.311 B -131.8 144.6 NA NA NA
ARG C:39 C:68 70.0 0.311 B -131.3 149.7 52.0 0.231 0.08 A:P00505:0.08
ARG D:39 D:68 82.0 0.364 B -133.1 146.9 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 ARG A:39 A:68 65.0 0.289 -123.8 144.2 45.0 0.2 0.089 B:P05202:0.089
 GOL
HOH
 4.873
3.172
 O
CB
 O3
O
ARG B:39 B:68 65.0 0.289 -134.0 151.4 46.0 0.204 0.085 A:P05202:0.084
 GOL
HOH
 4.873
3.281
 O
NH1
 O3
O
ARG C:39 C:68 65.0 0.289 -138.9 144.5 NA NA NA
ARG D:39 D:68 71.0 0.316 B -128.8 163.6 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:39 A:68 65.0 0.289 -135.4 151.3 45.0 0.2 0.089 B:P05202:0.089
 GOL
HOH
 4.626
3.372
 O
CB
 O1
O
ARG C:39 C:68 69.0 0.307 -136.2 142.7 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:39 B:68 65.0 0.289 -126.4 149.1 46.0 0.204 0.085 A:P05202:0.084
 GOL
HOH
 4.855
3.780
 O
NH1
 O1
O
ARG D:39 D:68 60.0 0.267 -141.3 140.5 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG A:39 A:68 66.0 0.293 -130.8 147.5 47.0 0.209 0.084 B:P05202:0.084
 BME
HOH
 5.701
3.472
 O
NH1
 S2
O
ARG C:39 C:68 63.0 0.28 -139.8 140.3 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ARG B:39 B:68 63.0 0.28 B -122.8 150.7 47.0 0.209 0.071 A:P05202:0.071
 GOL
BME
BME
HOH
 9.111
9.817
6.165
3.238
 NH1
NH1
O
NH2
 C3
O1
S2
O
ARG D:39 D:68 64.0 0.284 -130.2 142.3 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:39 A:41 71.0 0.316 B -131.1 150.3 51.0 0.227 0.089 A:P00508:0.089
 HOH
 2.928
 NH2
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 ARG A:39 A:39 75.0 0.333 B -119.5 150.2 54.0 0.24 0.093 A:P00508:0.093
 HOH
 2.653
 NH2
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:39 A:41 68.0 0.302 B -120.2 145.9 47.0 0.209 0.093 A:P00508:0.093
 HOH
 2.928
 CB
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:39 A:41 75.0 0.333 B -118.3 144.7 55.0 0.244 0.089 A:P00508:0.089
 HOH
 3.025
 NH2
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:39 A:41 64.0 0.284 -142.1 139.2 48.0 0.213 0.071 B:P00508:0.071
 HOH
 3.562
 CD
 O
ARG B:39 B:41 64.0 0.284 -136.6 144.6 44.0 0.196 0.088 A:P00508:0.089
 HOH
 2.450
 NE
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ARG A:39 A:41 72.0 0.32 B -123.9 141.6 54.0 0.24 0.08 A:P00508:0.08
 HOH
 2.723
 NH2
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:39 A:41 66.0 0.293 -139.1 142.4 49.0 0.218 0.075 B:P00508:0.076
 HOH
 3.740
 NH1
 O
ARG B:39 B:41 66.0 0.293 -139.3 147.3 48.0 0.213 0.08 A:P00508:0.08
 HOH
 3.580
 CB
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:39 A:41 75.0 0.333 B -118.1 152.0 52.0 0.231 0.102 B:P00508:0.102
ARG B:39 B:41 68.0 0.302 B -113.7 157.7 53.0 0.236 0.066 A:P00508:0.067
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ARG A:39 A:41 73.0 0.324 E -129.2 145.5 53.0 0.236 0.088 B:P00508:0.089
ARG B:39 B:41 65.0 0.289 B -109.5 156.2 47.0 0.209 0.08 A:P00508:0.08
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:39 A:41 66.0 0.293 -133.9 146.2 48.0 0.213 0.08 B:P00508:0.08
 HOH
 3.776
 NH1
 O
ARG B:39 B:41 67.0 0.298 -135.6 143.5 48.0 0.213 0.085 A:P00508:0.084
 HOH
 3.123
 NH2
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:39 A:41 65.0 0.289 -135.7 140.4 46.0 0.204 0.085 B:P00508:0.084
 HOH
 3.211
 NE
 O
ARG B:39 B:41 62.0 0.276 -135.0 141.1 43.0 0.191 0.085 A:P00508:0.084
 HOH
 3.684
 NH1
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ARG A:39 A:41 64.0 0.284 -136.7 144.0 46.0 0.204 0.08 B:P00508:0.08
 HOH
 3.453
 NH1
 O
ARG B:39 B:41 64.0 0.284 -136.6 140.9 45.0 0.2 0.084 A:P00508:0.084
 HOH
 3.096
 NE
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:39 A:41 61.0 0.271 -132.7 139.5 44.0 0.196 0.075 B:P00508:0.076
 HOH
 3.538
 NH1
 O
ARG B:39 B:41 65.0 0.289 -135.4 141.9 44.0 0.196 0.093 A:P00508:0.093
 HOH
 3.155
 NH2
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:39 A:41 72.0 0.32 B -125.5 148.7 52.0 0.231 0.089 A:P00508:0.089
 HOH
 2.915
 CB
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ARG A:39 A:41 67.0 0.298 B -120.0 146.9 47.0 0.209 0.089 A:P00508:0.089
 HOH
 2.796
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 ARG A:68 A:68 57.0 0.253 -131.1 150.8