Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 58757739 | . | T | A | CCDS10801.1:NM_002080.2:c.157Agg>Tgg_NP_002071.2:p.53R>W | Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5ax8 | 1 | P00505 | 99.75 | 0.0 |
X-RAY |
2016-03-16 | ARG | A:24 | A:53 | 202.0 | 0.898 | H | -67.7 | -34.3 | 202.0 | 0.898 | 0.0 | ||||||
| ARG | B:24 | B:53 | 160.0 | 0.711 | H | -82.6 | -22.9 | NA | NA | NA | |||||||||||||
| ARG | C:24 | C:53 | 159.0 | 0.707 | T | -80.3 | -20.9 | 159.0 | 0.707 | 0.0 | |||||||||||||
| ARG | D:24 | D:53 | 208.0 | 0.924 | S | -86.0 | -20.5 | NA | NA | NA | |||||||||||||
| 3hlm | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-06-02 | ARG | A:24 | A:53 | 175.0 | 0.778 | T | -79.1 | 1.5 | 175.0 | 0.778 | 0.0 |
HOH |
3.151 |
NE |
O |
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| ARG | B:24 | B:53 | 186.0 | 0.827 | H | -66.7 | -33.9 | 186.0 | 0.827 | 0.0 |
HOH |
2.975 |
NH1 |
O |
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| ARG | C:24 | C:53 | 175.0 | 0.778 | H | -70.1 | -31.6 | NA | NA | NA | |||||||||||||
| ARG | D:24 | D:53 | 165.0 | 0.733 | H | -70.6 | -24.9 | NA | NA | NA | |||||||||||||
| 3pd6 | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ARG | A:24 | A:53 | 172.0 | 0.764 | H | -71.3 | -15.9 | 172.0 | 0.764 | 0.0 |
HOH |
2.951 |
NH2 |
O |
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| ARG | C:24 | C:53 | 185.0 | 0.822 | T | -101.0 | 46.3 | NA | NA | NA | |||||||||||||
| 3pd6 | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ARG | B:24 | B:53 | 207.0 | 0.92 | T | -60.6 | -30.0 | 207.0 | 0.92 | 0.0 | ||||||
| ARG | D:24 | D:53 | 163.0 | 0.724 | T | -82.0 | -10.3 | NA | NA | NA | |||||||||||||
| 3pdb | 1 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ARG | A:24 | A:53 | 169.0 | 0.751 | H | -71.1 | -30.1 | 169.0 | 0.751 | 0.0 |
HOH |
2.616 |
NH2 |
O |
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| ARG | C:24 | C:53 | 191.0 | 0.849 | T | -84.6 | 55.1 | NA | NA | NA | |||||||||||||
| 3pdb | 2 | P05202 | 95.26 | 0.0 |
X-RAY |
2010-11-10 | ARG | B:24 | B:53 | 181.0 | 0.804 | H | -76.2 | -36.9 | 181.0 | 0.804 | 0.0 |
HOH |
3.608 |
CB |
O |
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| ARG | D:24 | D:53 | 174.0 | 0.773 | H | -70.0 | -21.8 | NA | NA | NA | |||||||||||||
| 1ama | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ARG | A:24 | A:26 | 191.0 | 0.849 | H | -73.3 | -18.6 | 191.0 | 0.849 | 0.0 |
HOH |
2.246 |
NH2 |
O |
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| 1ivr | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1997-07-23 | ARG | A:24 | A:24 | 184.0 | 0.818 | H | -65.9 | -13.4 | 184.0 | 0.818 | 0.0 |
HOH |
2.487 |
NH2 |
O |
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| 1map | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:24 | A:26 | 177.0 | 0.787 | H | -76.9 | -16.5 | 177.0 | 0.787 | 0.0 |
HOH |
3.043 |
CD |
O |
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| 1maq | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:24 | A:26 | 183.0 | 0.813 | H | -79.8 | -22.4 | 183.0 | 0.813 | 0.0 |
HOH |
3.040 |
CD |
O |
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| 1oxo | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | ARG | A:24 | A:26 | 177.0 | 0.787 | H | -71.4 | -40.9 | 177.0 | 0.787 | 0.0 |
HOH |
2.847 |
O |
O |
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| ARG | B:24 | B:26 | 230.0 | 1.0 | T | -71.3 | 5.6 | 230.0 | 1.0 | 0.0 |
HOH |
3.663 |
O |
O |
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| 1oxp | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1996-06-10 | ARG | A:24 | A:26 | 188.0 | 0.836 | T | -57.8 | -20.9 | 188.0 | 0.836 | 0.0 |
HOH |
2.518 |
NH2 |
O |
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| 1tar | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:24 | A:26 | 167.0 | 0.742 | H | -56.2 | -60.9 | 167.0 | 0.742 | 0.0 |
HOH |
6.862 |
C |
O |
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| ARG | B:24 | B:26 | 168.0 | 0.747 | H | -72.6 | -18.4 | 168.0 | 0.747 | 0.0 |
HOH |
3.410 |
CD |
O |
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| 1tas | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:24 | A:26 | 192.0 | 0.853 | T | -95.5 | 28.3 | 192.0 | 0.853 | 0.0 | ||||||
| ARG | B:24 | B:26 | 185.0 | 0.822 | T | -91.1 | -10.3 | 185.0 | 0.822 | 0.0 | |||||||||||||
| 1tat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:24 | A:26 | 173.0 | 0.769 | H | -92.7 | -19.6 | 173.0 | 0.769 | 0.0 | ||||||
| ARG | B:24 | B:26 | 182.0 | 0.809 | H | -80.2 | -19.8 | 182.0 | 0.809 | 0.0 | |||||||||||||
| 7aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ARG | A:24 | A:26 | 176.0 | 0.782 | H | -68.9 | -42.2 | 176.0 | 0.782 | 0.0 |
HOH |
2.773 |
O |
O |
||
| ARG | B:24 | B:26 | 233.0 | 1.0 | T | -77.6 | 22.1 | 233.0 | 1.0 | 0.0 |
HOH |
4.400 |
O |
O |
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| 8aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ARG | A:24 | A:26 | 178.0 | 0.791 | H | -76.7 | -25.9 | 178.0 | 0.791 | 0.0 |
HOH |
2.992 |
O |
O |
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| ARG | B:24 | B:26 | 217.0 | 0.964 | T | -64.6 | 7.5 | 217.0 | 0.964 | 0.0 |
HOH |
4.313 |
CD |
O |
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| 9aat | 1 | P00508 | 86.28 | 0.0 |
X-RAY |
1993-10-31 | ARG | A:24 | A:26 | 172.0 | 0.764 | H | -77.5 | -26.2 | 172.0 | 0.764 | 0.0 |
HOH |
2.847 |
O |
O |
||
| ARG | B:24 | B:26 | 225.0 | 1.0 | T | -76.5 | 24.5 | 225.0 | 1.0 | 0.0 | |||||||||||||
| 1aka | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ARG | A:24 | A:26 | 173.0 | 0.769 | H | -68.2 | -40.8 | 173.0 | 0.769 | 0.0 |
HOH |
2.848 |
O |
O |
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| ARG | B:24 | B:26 | 228.0 | 1.0 | H | -64.9 | -12.0 | 228.0 | 1.0 | 0.0 |
HOH |
4.412 |
CB |
O |
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| 1akb | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ARG | A:24 | A:26 | 182.0 | 0.809 | H | -73.6 | -24.5 | 182.0 | 0.809 | 0.0 |
HOH |
3.571 |
CG |
O |
||
| 1akc | 1 | P00508 | 86.03 | 0.0 |
X-RAY |
1994-07-31 | ARG | A:24 | A:26 | 182.0 | 0.809 | H | -72.1 | -22.4 | 182.0 | 0.809 | 0.0 |
HOH |
2.838 |
O |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p00505-f1 | 1 | P00505 | 100.0 | 0.0 | ARG | A:53 | A:53 | 172.0 | 0.764 | H | -76.5 | -23.7 | |