Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58757747 . G A CCDS10801.1:NM_002080.2:c.149gCc>gTc_NP_002071.2:p.50A>V Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 ALA A:21 A:50 42.0 0.365 H -60.2 -36.6 42.0 0.365 0.0
ALA B:21 B:50 26.0 0.226 H -66.0 -22.5 NA NA NA
ALA C:21 C:50 31.0 0.27 H -63.6 -21.4 31.0 0.27 0.0
ALA D:21 D:50 54.0 0.47 H -62.9 -22.2 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 ALA A:21 A:50 28.0 0.243 H -55.3 -48.8 28.0 0.243 0.0 HOH
 4.699
 CA
 O
ALA B:21 B:50 20.0 0.174 H -69.5 -43.3 20.0 0.174 0.0 HOH
 2.373
 O
 O
ALA C:21 C:50 27.0 0.235 H -65.6 -45.3 NA NA NA
ALA D:21 D:50 23.0 0.2 H -71.0 -46.9 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ALA A:21 A:50 29.0 0.252 H -52.6 -44.5 29.0 0.252 0.0 HOH
 2.772
 O
 O
ALA C:21 C:50 23.0 0.2 H -68.3 -41.1 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ALA B:21 B:50 35.0 0.304 T -97.4 -9.8 35.0 0.304 0.0
ALA D:21 D:50 26.0 0.226 H -54.1 -33.9 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ALA A:21 A:50 25.0 0.217 H -57.5 -44.8 25.0 0.217 0.0 HOH
 2.567
 O
 O
ALA C:21 C:50 26.0 0.226 H -53.9 -43.8 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ALA B:21 B:50 30.0 0.261 H -57.2 -30.1 30.0 0.261 0.0 HOH
 2.481
 O
 O
ALA D:21 D:50 24.0 0.209 H -56.1 -47.5 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ALA A:21 A:23 40.0 0.348 H -61.8 -42.6 40.0 0.348 0.0 HOH
 3.368
 O
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 ALA A:21 A:21 39.0 0.339 H -69.7 -37.1 39.0 0.339 0.0 HOH
 3.164
 O
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ALA A:21 A:23 31.0 0.27 H -65.0 -41.0 31.0 0.27 0.0 HOH
 3.335
 O
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ALA A:21 A:23 30.0 0.261 H -66.3 -41.4 30.0 0.261 0.0 HOH
 3.526
 O
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ALA A:21 A:23 22.0 0.191 H -68.0 -43.0 22.0 0.191 0.0 HOH
 2.582
 O
 O
ALA B:21 B:23 42.0 0.365 H -61.2 -43.0 42.0 0.365 0.0 HOH
 2.923
 O
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ALA A:21 A:23 41.0 0.357 H -60.3 -36.0 41.0 0.357 0.0 HOH
 3.007
 O
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ALA A:21 A:23 26.0 0.226 H -57.0 -40.4 26.0 0.226 0.0 HOH
 7.213
 O
 O
ALA B:21 B:23 20.0 0.174 H -60.6 -42.0 20.0 0.174 0.0 HOH
 2.755
 O
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ALA A:21 A:23 27.0 0.235 H -58.4 -25.7 27.0 0.235 0.0
ALA B:21 B:23 41.0 0.357 H -49.1 -32.8 41.0 0.357 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ALA A:21 A:23 30.0 0.261 H -50.6 -47.1 30.0 0.261 0.0
ALA B:21 B:23 30.0 0.261 H -62.2 -44.6 30.0 0.261 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ALA A:21 A:23 22.0 0.191 H -63.0 -44.8 22.0 0.191 0.0 HOH
 2.978
 O
 O
ALA B:21 B:23 44.0 0.383 H -68.7 -29.4 44.0 0.383 0.0 HOH
 3.007
 O
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ALA A:21 A:23 23.0 0.2 H -66.7 -40.6 23.0 0.2 0.0 HOH
 2.920
 O
 O
ALA B:21 B:23 41.0 0.357 H -68.3 -32.8 41.0 0.357 0.0 HOH
 3.414
 O
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ALA A:21 A:23 19.0 0.165 H -64.1 -43.1 19.0 0.165 0.0 HOH
 2.975
 O
 O
ALA B:21 B:23 41.0 0.357 H -70.5 -27.7 41.0 0.357 0.0 HOH
 6.380
 CB
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ALA A:21 A:23 22.0 0.191 H -65.3 -45.6 22.0 0.191 0.0 HOH
 2.940
 O
 O
ALA B:21 B:23 44.0 0.383 H -66.7 -28.5 44.0 0.383 0.0 HOH
 3.083
 O
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ALA A:21 A:23 30.0 0.261 H -66.5 -36.6 30.0 0.261 0.0 HOH
 3.212
 O
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ALA A:21 A:23 28.0 0.243 H -59.9 -45.5 28.0 0.243 0.0 HOH
 3.336
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 ALA A:50 A:50 26.0 0.226 H -60.8 -44.7