Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 32583271 . A C CCDS11277.1:NM_002982.3:c.107tAt>tCt_NP_002973.1:p.36Y>S Homo sapiens C-C motif chemokine ligand 2 (CCL2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4zk9 2 P13500 100.0 6e-53 X-RAY
 2015-07-08 TYR B:13 B:13 193.0 0.839 S -95.1 -20.8 59.0 0.257 0.582 A:Q2F862:0.583
2bdn 1 P13500 100.0 1e-52 X-RAY
 2006-06-13 TYR A:13 A:13 168.0 0.73 S -110.8 2.1 53.0 0.23 0.5 A:P13500:0.5
 HOH
 2.948
 OH
 O
3ifd 1 P13500 100.0 1e-52 X-RAY
 2009-08-04 TYR A:13 A:13 174.0 0.757 S -112.1 -13.8 144.0 0.626 0.131 A:P13500:0.13
 K
HOH
 7.490
5.151
 O
N
 K
O
1dok 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 TYR A:14 A:13 163.0 0.709 S -111.8 -28.8 55.0 0.239 0.47 B:P13500:0.47
 HOH
 2.826
 N
 O
TYR B:14 B:13 141.0 0.613 S -113.9 -32.4 29.0 0.126 0.487 A:P13500:0.487
 HOH
 3.004
 OH
 O
1dol 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 TYR A:14 A:13 168.0 0.73 S -106.7 -13.7 168.0 0.73 0.0 HOH
 2.680
 OH
 O
4r8i 1 P13500 100.0 2e-52 X-RAY
 2015-04-29 TYR A:14 A:13 146.0 0.635 -117.0 -37.5 146.0 0.635 0.0 HOH
 3.353
 OH
 O
2nz1 2 P13500 98.68 9e-52 X-RAY
 2007-12-25 TYR C:13 D:13 140.0 0.609 S -114.8 -16.5 9.0 0.039 0.57 A:O41925:0.57
 HOH
 2.514
 OH
 O
TYR D:13 E:13 135.0 0.587 S -116.8 -10.7 7.0 0.03 0.557 B:O41925:0.557
 HOH
 2.801
 OH
 O
TYR F:13 Y:13 136.0 0.591 S -110.4 -23.2 NA NA NA
4dn4 3 P13500 98.68 2e-51 X-RAY
 2012-10-03 TYR C:13 M:13 168.0 0.73 S -115.9 -34.9 168.0 0.73 0.0 HOH
 4.757
 N
 O
1ml0 2 P13500 97.37 1e-50 X-RAY
 2002-11-13 TYR B:13 D:13 135.0 0.587 S -116.8 -9.0 9.0 0.039 0.548 A:O41925:0.548
 HOH
 8.908
 CE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p13500-f1 1 P13500 100.0 2e-70 TYR A:36 A:36 170.0 0.739 S -101.5 -29.3