Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 32583310 . C A CCDS11277.1:NM_002982.3:c.146gCg>gAg_NP_002973.1:p.49A>E Homo sapiens C-C motif chemokine ligand 2 (CCL2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4zk9 2 P13500 100.0 6e-53 X-RAY
 2015-07-08 ALA B:26 B:26 70.0 0.609 E -139.5 -63.3 70.0 0.609 0.0
2bdn 1 P13500 100.0 1e-52 X-RAY
 2006-06-13 ALA A:26 A:26 59.0 0.513 E -120.7 -31.5 59.0 0.513 0.0 HOH
 7.961
 C
 O
3ifd 1 P13500 100.0 1e-52 X-RAY
 2009-08-04 ALA A:26 A:26 57.0 0.496 E -102.1 -54.4 57.0 0.496 0.0 HOH
 7.462
 C
 O
1dok 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 ALA A:27 A:26 60.0 0.522 E -100.1 -44.0 60.0 0.522 0.0 HOH
 3.434
 CB
 O
ALA B:27 B:26 33.0 0.287 E -100.9 -40.7 33.0 0.287 0.0 HOH
 3.591
 CB
 O
1dol 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 ALA A:27 A:26 57.0 0.496 E -105.1 -31.8 57.0 0.496 0.0 HOH
 3.666
 O
 O
4r8i 1 P13500 100.0 2e-52 X-RAY
 2015-04-29 ALA A:27 A:26 46.0 0.4 E -95.1 -37.9 46.0 0.4 0.0 HOH
 4.822
 O
 O
2nz1 2 P13500 98.68 9e-52 X-RAY
 2007-12-25 ALA C:26 D:26 44.0 0.383 E -73.4 -59.5 44.0 0.383 0.0 HOH
 3.369
 O
 O
ALA D:26 E:26 51.0 0.443 E -97.9 -44.3 51.0 0.443 0.0 HOH
 3.874
 CA
 O
ALA F:26 Y:26 45.0 0.391 E -90.6 -45.3 NA NA NA
4dn4 3 P13500 98.68 2e-51 X-RAY
 2012-10-03 ALA C:26 M:26 51.0 0.443 E -88.5 -49.7 51.0 0.443 0.0
1ml0 2 P13500 97.37 1e-50 X-RAY
 2002-11-13 ALA B:26 D:26 49.0 0.426 E -67.8 -83.3 49.0 0.426 0.0 HOH
 4.788
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p13500-f1 1 P13500 100.0 2e-70 ALA A:49 A:49 55.0 0.478 E -100.8 -39.8