Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 32583757 . G A CCDS11277.1:NM_002982.3:c.211Gcc>Acc_NP_002973.1:p.71A>T Homo sapiens C-C motif chemokine ligand 2 (CCL2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4zk9 2 P13500 100.0 6e-53 X-RAY
 2015-07-08 ALA B:48 B:48 91.0 0.791 S 65.4 25.6 91.0 0.791 0.0 NAG
NAG
 8.811
9.653
 O
O
 O3
C6
2bdn 1 P13500 100.0 1e-52 X-RAY
 2006-06-13 ALA A:48 A:48 66.0 0.574 S 66.7 11.1 66.0 0.574 0.0 HOH
 7.441
 N
 O
3ifd 1 P13500 100.0 1e-52 X-RAY
 2009-08-04 ALA A:48 A:48 66.0 0.574 62.9 24.9 66.0 0.574 0.0 HOH
 7.986
 O
 O
1dok 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 ALA A:49 A:48 72.0 0.626 71.8 7.7 72.0 0.626 0.0 HOH
 4.465
 CA
 O
ALA B:49 B:48 68.0 0.591 S 70.7 40.0 68.0 0.591 0.0 HOH
 2.881
 O
 O
1dol 1 P13500 100.0 2e-52 X-RAY
 1997-03-12 ALA A:49 A:48 69.0 0.6 S 57.2 52.1 69.0 0.6 0.0 HOH
 2.949
 O
 O
4r8i 1 P13500 100.0 2e-52 X-RAY
 2015-04-29 ALA A:49 A:48 60.0 0.522 68.0 8.5 60.0 0.522 0.0 0G
HOH
 9.609
9.986
 N
N
 OP1
O
2nz1 2 P13500 98.68 9e-52 X-RAY
 2007-12-25 ALA C:48 D:48 70.0 0.609 S 65.6 30.6 70.0 0.609 0.0 HOH
 5.742
 N
 O
ALA D:48 E:48 74.0 0.643 S 67.8 22.8 74.0 0.643 0.0 HOH
 3.693
 CB
 O
ALA F:48 Y:48 71.0 0.617 S 63.2 25.4 NA NA NA
4dn4 3 P13500 98.68 2e-51 X-RAY
 2012-10-03 ALA C:48 M:48 76.0 0.661 S 72.0 -38.7 60.0 0.522 0.139 B:None:0.139
 HOH
 9.764
 C
 O
1ml0 2 P13500 97.37 1e-50 X-RAY
 2002-11-13 ALA B:48 D:48 76.0 0.661 S 61.6 28.3 76.0 0.661 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p13500-f1 1 P13500 100.0 2e-70 ALA A:71 A:71 66.0 0.574 S 60.2 15.4