Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 36895338 . G A CCDS32638.1:NM_007144.2:c.299gCg>gTg_NP_009075.1:p.100A>V Homo sapiens polycomb group ring finger 2 (PCGF2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3rpg 2 P35226 88.99 8e-70 X-RAY
 2011-08-17 ALA B:100 B:100 71.0 0.617 -75.9 -6.5 71.0 0.617 0.0
4r8p 7 P35226 88.89 5e-69 X-RAY
 2014-11-05 ALA K:101 K:100 77.0 0.67 T -123.3 -13.3 77.0 0.67 0.0
ALA M:101 M:100 84.0 0.73 S -98.9 13.2 84.0 0.73 0.0
2ckl 1 P25916 88.89 5e-69 X-RAY
 2006-05-11 ALA A:100 A:100 72.0 0.626 H -86.6 -17.2 72.0 0.626 0.0 HOH
 3.887
 CB
 O
6wi7 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 ALA A:207 A:1100 70.0 0.609 H -77.2 -17.0 70.0 0.609 0.0 HOH
 3.873
 N
 O
6wi8 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 ALA A:207 A:1100 69.0 0.6 T -112.9 -9.7 69.0 0.6 0.0
ALA B:207 B:1100 65.0 0.565 T -105.6 -23.8 NA NA NA
7nd1 2 P35226 92.93 2e-65 NMR
 2021-06-16 ALA B:97 H:1100 65.0 0.565 H -102.2 -9.6 65.0 0.565 0.0
2h0d 1 Q5T8Z3 92.78 7e-65 X-RAY
 2006-05-23 ALA A:96 A:100 74.0 0.643 H -73.9 -32.3 74.0 0.643 0.0 HOH
 4.686
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p35227-f1 1 P35227 100.0 0.0 ALA A:100 A:100 68.0 0.591 H -80.2 -25.3