Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 36895876 . C A CCDS32638.1:NM_007144.2:c.172Gtg>Ttg_NP_009075.1:p.58V>L Homo sapiens polycomb group ring finger 2 (PCGF2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3rpg 2 P35226 88.99 8e-70 X-RAY
 2011-08-17 VAL B:58 B:58 61.0 0.394 -69.0 155.5 61.0 0.394 0.0 ZN
HOH
 4.437
3.601
 CG1
CG2
 ZN
O
4r8p 7 P35226 88.89 5e-69 X-RAY
 2014-11-05 VAL K:59 K:58 63.0 0.406 -78.8 131.9 63.0 0.406 0.0 ZN
 5.020
 CB
 ZN
VAL M:59 M:58 63.0 0.406 -92.5 134.8 63.0 0.406 0.0 ZN
 5.285
 CB
 ZN
2ckl 1 P25916 88.89 5e-69 X-RAY
 2006-05-11 VAL A:58 A:58 59.0 0.381 -70.8 141.9 59.0 0.381 0.0 ZN
HOH
 4.224
3.486
 CG1
CG2
 ZN
O
6wi7 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 VAL A:165 A:1058 64.0 0.413 -78.9 139.6 64.0 0.413 0.0 HOH
 5.730
 N
 O
6wi8 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 VAL A:165 A:1058 60.0 0.387 -88.2 154.9 60.0 0.387 0.0 ZN
 4.436
 CG2
 ZN
VAL B:165 B:1058 56.0 0.361 -101.4 152.5 NA NA NA
7nd1 2 P35226 92.93 2e-65 NMR
 2021-06-16 VAL B:55 H:1058 56.0 0.361 -73.7 159.2 56.0 0.361 0.0 ZN
 3.466
 HG22
 ZN
2h0d 1 Q5T8Z3 92.78 7e-65 X-RAY
 2006-05-23 VAL A:54 A:58 70.0 0.452 -65.6 143.5 70.0 0.452 0.0 ZN
HOH
 5.208
6.829
 CB
CG1
 ZN
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p35227-f1 1 P35227 100.0 0.0 VAL A:58 A:58 61.0 0.394 -64.4 131.6