Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 37863331 | . | G | A | CCDS32642.1:NM_004448.2:c.162caG>caA_NP_004439.2:p.54Q>Q | Homo sapiens v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 (ERBB2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 7mn5 | 3 | P04626,P0AEX9 | 99.9 | 0.0 |
EM |
2021-10-27 | GLN | C:54 | B:54 | 73.0 | 0.406 | S | -111.5 | -31.8 | 73.0 | 0.406 | 0.0 |
NAG NAG BMA MAN |
6.750 2.702 4.881 5.121 |
OE1 NE2 NE2 NE2 |
O3 O6 O2 C6 |
||
| 7mn6 | 2 | P04626,P0AEX9 | 99.81 | 0.0 |
EM |
2021-10-27 | GLN | B:54 | B:54 | 70.0 | 0.389 | S | -107.3 | -36.6 | 70.0 | 0.389 | 0.0 |
NAG NAG BMA MAN |
5.622 3.916 5.142 6.718 |
OE1 OE1 NE2 NE2 |
O4 C5 O2 C6 |
||
| 7mn8 | 3 | P04626,P0AEX9 | 99.81 | 0.0 |
EM |
2021-11-10 | GLN | C:54 | B:54 | 67.0 | 0.372 | S | -105.9 | -33.2 | 67.0 | 0.372 | 0.0 |
NAG NAG BMA MAN |
5.284 3.747 4.148 6.573 |
OE1 NE2 NE2 NE2 |
O6 O4 O2 O5 |
||
| 6bgt | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-10-31 | GLN | A:54 | C:32 | 57.0 | 0.317 | -113.3 | -27.1 | 57.0 | 0.317 | 0.0 |
NAG HOH |
6.935 2.939 |
NE2 OE1 |
O4 O |
|||
| 5kwg | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-04-12 | GLN | A:32 | C:32 | 98.0 | 0.544 | -88.8 | -51.6 | 98.0 | 0.544 | 0.0 | |||||||
| 6att | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-04-25 | GLN | A:32 | A:32 | 51.0 | 0.283 | S | -114.2 | -25.9 | 51.0 | 0.283 | 0.0 |
NAG NAG |
6.986 5.523 |
OE1 OE1 |
O3 C6 |
||
| 1s78 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2004-04-27 | GLN | A:32 | A:32 | 65.0 | 0.361 | -114.4 | -36.1 | 65.0 | 0.361 | 0.0 |
NAG NAG |
7.132 3.479 |
NE2 OE1 |
O3 O6 |
|||
| GLN | B:32 | B:32 | 65.0 | 0.361 | -114.6 | -40.3 | NA | NA | NA | ||||||||||||||
| 3be1 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2008-11-18 | GLN | A:32 | A:32 | 63.0 | 0.35 | S | -100.9 | -33.9 | 63.0 | 0.35 | 0.0 |
NAG |
7.160 |
OE1 |
O3 |
||
| 3mzw | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2010-07-28 | GLN | A:32 | A:32 | 59.0 | 0.328 | -120.8 | -26.5 | 59.0 | 0.328 | 0.0 |
NAG NAG HOH |
6.635 3.299 8.335 |
NE2 NE2 C |
O3 C6 O |
|||
| 3n85 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2010-07-28 | GLN | A:32 | A:32 | 65.0 | 0.361 | -117.9 | -43.6 | 65.0 | 0.361 | 0.0 |
NAG NAG BMA |
6.428 5.270 5.721 |
NE2 NE2 NE2 |
O3 C6 O6 |
|||
| 5my6 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-08-09 | GLN | A:31 | A:54 | 73.0 | 0.406 | -110.4 | -35.9 | 73.0 | 0.406 | 0.0 |
NAG NAG HOH |
7.992 6.664 3.183 |
OE1 NE2 NE2 |
C4 C5 O |
|||
| 6oge | 1 | P04626 | 100.0 | 0.0 |
EM |
2019-05-15 | GLN | A:32 | A:54 | 50.0 | 0.278 | -105.2 | -32.1 | 50.0 | 0.278 | 0.0 |
NAG NAG BMA MAN |
5.124 5.403 5.441 6.154 |
OE1 NE2 NE2 NE2 |
O3 O4 O2 C6 |
|||
| 6j71 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | GLN | A:33 | A:54 | 68.0 | 0.378 | S | -111.4 | -32.3 | 68.0 | 0.378 | 0.0 |
NAG BMA |
6.592 7.019 |
OE1 OE1 |
O3 O6 |
||
| 1n8z | 3 | P04626 | 100.0 | 0.0 |
X-RAY |
2003-02-18 | GLN | C:32 | C:32 | 53.0 | 0.294 | -113.8 | -25.4 | 53.0 | 0.294 | 0.0 |
NAG HOH |
7.135 8.526 |
OE1 O |
O3 O |
|||
| 5k33 | 2 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-04-12 | GLN | B:32 | C:32 | 57.0 | 0.317 | -108.0 | -28.2 | 57.0 | 0.317 | 0.0 |
NAG NAG BMA MAN |
7.439 5.809 3.209 9.077 |
OE1 HE22 HE22 HE22 |
H2 O3 O6 H1 |
|||
| 5o4g | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-05-16 | GLN | A:32 | C:32 | 67.0 | 0.372 | -109.2 | -38.1 | 67.0 | 0.372 | 0.0 |
NAG NAG |
7.874 5.897 |
OE1 NE2 |
O6 C6 |
|||
| 3wlw | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2015-05-27 | GLN | A:32 | A:32 | 58.0 | 0.322 | S | -98.4 | -27.6 | 58.0 | 0.322 | 0.0 |
NAG NAG HOH |
7.350 4.911 3.713 |
NE2 NE2 NE2 |
O3 O4 O |
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| GLN | B:32 | B:32 | 54.0 | 0.3 | S | -108.1 | -48.2 | NA | NA | NA | |||||||||||||
| 3wsq | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2015-03-25 | GLN | A:32 | A:32 | 57.0 | 0.317 | S | -111.3 | -73.8 | 57.0 | 0.317 | 0.0 | ||||||
| 1n8y | 1 | 22651765 | 85.53 | 0.0 |
X-RAY |
2003-02-18 | GLN | A:32 | C:32 | 59.0 | 0.328 | S | -104.9 | -36.0 | 59.0 | 0.328 | 0.0 |
NAG NAG HOH |
7.505 5.248 5.308 |
NE2 NE2 N |
O3 O6 O |
||
| 2a91 | 1 | P04626 | 99.61 | 0.0 |
X-RAY |
2005-07-26 | GLN | A:33 | A:33 | 64.0 | 0.356 | -116.9 | -39.1 | 64.0 | 0.356 | 0.0 |
NAG NAG HOH |
8.219 6.673 5.132 |
NE2 OE1 N |
C4 C6 O |
|||
| 4hrl | 1 | P04626 | 98.47 | 3e-130 |
X-RAY |
2013-10-16 | GLN | A:32 | C:32 | 63.0 | 0.35 | -85.1 | -42.1 | 63.0 | 0.35 | 0.0 |
HOH |
4.863 |
N |
O |
|||
| 4hrm | 1 | P04626 | 98.47 | 3e-130 |
X-RAY |
2013-10-16 | GLN | A:32 | C:32 | 81.0 | 0.45 | S | -113.2 | -32.0 | 81.0 | 0.45 | 0.0 | ||||||
| GLN | B:32 | A:32 | 74.0 | NA | -124.2 | 360.0 | 74.0 | NA | NA | ||||||||||||||
| 3h3b | 1 | P04626 | 99.48 | 3e-130 |
X-RAY |
2010-04-28 | GLN | A:34 | A:32 | 50.0 | 0.278 | S | -109.3 | -34.5 | 50.0 | 0.278 | 0.0 |
HOH |
4.287 |
OE1 |
O |
||
| GLN | B:34 | B:32 | 38.0 | 0.211 | S | -114.2 | -28.8 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04626-f1 | 1 | P04626 | 100.0 | 0.0 | GLN | A:54 | A:54 | 52.0 | 0.289 | S | -109.3 | -28.7 | |