Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 37863332 | . | G | A | CCDS32642.1:NM_004448.2:c.163Gtg>Atg_NP_004439.2:p.55V>M | Homo sapiens v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 (ERBB2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 7mn5 | 3 | P04626,P0AEX9 | 99.9 | 0.0 |
EM |
2021-10-27 | VAL | C:55 | B:55 | 33.0 | 0.213 | E | -123.6 | 125.3 | 33.0 | 0.213 | 0.0 |
NAG NAG |
7.455 8.415 |
CG2 CG2 |
C2 C6 |
||
| 7mn6 | 2 | P04626,P0AEX9 | 99.81 | 0.0 |
EM |
2021-10-27 | VAL | B:55 | B:55 | 32.0 | 0.206 | E | -119.8 | 122.5 | 32.0 | 0.206 | 0.0 |
NAG NAG |
7.075 8.027 |
CG2 CG2 |
O7 O6 |
||
| 7mn8 | 3 | P04626,P0AEX9 | 99.81 | 0.0 |
EM |
2021-11-10 | VAL | C:55 | B:55 | 24.0 | 0.155 | E | -123.8 | 128.9 | 24.0 | 0.155 | 0.0 |
NAG NAG |
7.046 7.949 |
CG2 CG2 |
O6 O6 |
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| 6bgt | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-10-31 | VAL | A:55 | C:33 | 20.0 | 0.129 | E | -127.9 | 112.5 | 20.0 | 0.129 | 0.0 |
NAG HOH |
6.980 3.590 |
CG2 CG1 |
O7 O |
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| 5kwg | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-04-12 | VAL | A:33 | C:33 | 12.0 | 0.077 | -144.5 | 176.8 | 12.0 | 0.077 | 0.0 | |||||||
| 6att | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-04-25 | VAL | A:33 | A:33 | 18.0 | 0.116 | E | -126.5 | 103.0 | 18.0 | 0.116 | 0.0 |
NAG |
7.664 |
CG2 |
O7 |
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| 1s78 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2004-04-27 | VAL | A:33 | A:33 | 22.0 | 0.142 | E | -110.6 | 126.2 | 22.0 | 0.142 | 0.0 |
NAG NAG |
7.227 7.522 |
CG2 CG2 |
N2 O6 |
||
| VAL | B:33 | B:33 | 22.0 | 0.142 | E | -106.6 | 127.8 | NA | NA | NA | |||||||||||||
| 3be1 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2008-11-18 | VAL | A:33 | A:33 | 25.0 | 0.161 | E | -123.8 | 113.4 | 25.0 | 0.161 | 0.0 |
NAG |
7.176 |
CG2 |
O7 |
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| 3mzw | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2010-07-28 | VAL | A:33 | A:33 | 22.0 | 0.142 | E | -131.1 | 123.2 | 22.0 | 0.142 | 0.0 |
NAG NAG HOH |
7.345 8.424 3.988 |
CG2 CG2 CG1 |
N2 O6 O |
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| 3n85 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2010-07-28 | VAL | A:33 | A:33 | 21.0 | 0.135 | E | -112.8 | 120.0 | 21.0 | 0.135 | 0.0 |
NAG NAG |
6.908 9.778 |
CG2 CG2 |
O7 O5 |
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| 5my6 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-08-09 | VAL | A:32 | A:55 | 28.0 | 0.181 | E | -116.8 | 116.5 | 28.0 | 0.181 | 0.0 |
NAG HOH |
6.868 3.650 |
CG2 CG1 |
C8 O |
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| 6oge | 1 | P04626 | 100.0 | 0.0 |
EM |
2019-05-15 | VAL | A:33 | A:55 | 25.0 | 0.161 | E | -122.4 | 127.7 | 25.0 | 0.161 | 0.0 |
NAG NAG |
6.336 9.022 |
CG2 CG2 |
O3 O7 |
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| 6j71 | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2019-02-27 | VAL | A:34 | A:55 | 33.0 | 0.213 | E | -126.4 | 112.8 | 33.0 | 0.213 | 0.0 |
NAG |
8.144 |
CG2 |
O7 |
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| 1n8z | 3 | P04626 | 100.0 | 0.0 |
X-RAY |
2003-02-18 | VAL | C:33 | C:33 | 28.0 | 0.181 | E | -128.7 | 117.2 | 28.0 | 0.181 | 0.0 |
NAG HOH |
6.705 6.496 |
CG2 CG2 |
O7 O |
||
| 5k33 | 2 | P04626 | 100.0 | 0.0 |
X-RAY |
2017-04-12 | VAL | B:33 | C:33 | 31.0 | 0.2 | E | -130.3 | 119.7 | 31.0 | 0.2 | 0.0 |
NAG NAG BMA |
6.237 9.132 9.242 |
HG21 HG23 HG23 |
HN2 HN2 HO6 |
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| 5o4g | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2018-05-16 | VAL | A:33 | C:33 | 24.0 | 0.155 | E | -114.1 | 123.6 | 24.0 | 0.155 | 0.0 |
NAG |
6.537 |
CG2 |
O7 |
||
| 3wlw | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2015-05-27 | VAL | A:33 | A:33 | 12.0 | 0.077 | E | -132.6 | 131.0 | 12.0 | 0.077 | 0.0 |
NAG NAG HOH |
7.359 9.984 4.642 |
CG2 CG2 CG1 |
O7 O5 O |
||
| VAL | B:33 | B:33 | 18.0 | 0.116 | E | -112.3 | 120.4 | NA | NA | NA | |||||||||||||
| 3wsq | 1 | P04626 | 100.0 | 0.0 |
X-RAY |
2015-03-25 | VAL | A:33 | A:33 | 23.0 | 0.148 | -79.5 | 148.4 | 23.0 | 0.148 | 0.0 | |||||||
| 1n8y | 1 | 22651765 | 85.53 | 0.0 |
X-RAY |
2003-02-18 | VAL | A:33 | C:33 | 27.0 | 0.174 | E | -119.1 | 117.3 | 27.0 | 0.174 | 0.0 |
NAG NAG HOH |
7.253 9.666 3.768 |
CG2 CG2 CG1 |
O7 O6 O |
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| 2a91 | 1 | P04626 | 99.61 | 0.0 |
X-RAY |
2005-07-26 | VAL | A:34 | A:34 | 20.0 | 0.129 | E | -117.3 | 117.9 | 20.0 | 0.129 | 0.0 |
NAG HOH |
7.156 3.687 |
CG2 CG1 |
O7 O |
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| 4hrl | 1 | P04626 | 98.47 | 3e-130 |
X-RAY |
2013-10-16 | VAL | A:33 | C:33 | 25.0 | 0.161 | E | -122.7 | 123.2 | 25.0 | 0.161 | 0.0 |
HOH |
7.048 |
N |
O |
||
| 4hrm | 1 | P04626 | 98.47 | 3e-130 |
X-RAY |
2013-10-16 | VAL | A:33 | C:33 | 20.0 | 0.129 | B | -124.8 | 112.4 | 20.0 | 0.129 | 0.0 | ||||||
| VAL | B:33 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3h3b | 1 | P04626 | 99.48 | 3e-130 |
X-RAY |
2010-04-28 | VAL | A:35 | A:33 | 10.0 | 0.065 | E | -123.6 | 111.0 | 10.0 | 0.065 | 0.0 |
HOH |
4.163 |
CG1 |
O |
||
| VAL | B:35 | B:33 | 18.0 | 0.116 | E | -131.0 | 121.3 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04626-f1 | 1 | P04626 | 100.0 | 0.0 | VAL | A:55 | A:55 | 20.0 | 0.129 | E | -129.4 | 114.5 | |