Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 37864584 . A C CCDS32642.1:NM_004448.2:c.236gAg>gCg_NP_004439.2:p.79E>A Homo sapiens v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 (ERBB2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mn5 3 P04626,P0AEX9 99.9 0.0 EM
 2021-10-27 GLU C:79 B:79 24.0 0.126 E -134.7 135.3 24.0 0.126 0.0 NAG
NAG
 6.881
9.916
 OE1
N
 N2
C6
7mn6 2 P04626,P0AEX9 99.81 0.0 EM
 2021-10-27 GLU B:79 B:79 29.0 0.153 E -131.6 143.7 29.0 0.153 0.0 NAG
NAG
 3.772
7.413
 OE2
OE2
 O7
O6
7mn8 3 P04626,P0AEX9 99.81 0.0 EM
 2021-11-10 GLU C:79 B:79 26.0 0.137 E -135.0 140.9 26.0 0.137 0.0 NAG
NAG
 4.168
7.760
 OE2
OE2
 O7
O6
6bgt 1 P04626 100.0 0.0 X-RAY
 2018-10-31 GLU A:79 C:57 25.0 0.132 E -134.6 136.8 25.0 0.132 0.0 NAG
HOH
 3.947
5.050
 OE1
OE2
 O7
O
5kwg 1 P04626 100.0 0.0 X-RAY
 2017-04-12 GLU A:57 C:57 25.0 0.132 -147.5 164.7 25.0 0.132 0.0
6att 1 P04626 100.0 0.0 X-RAY
 2018-04-25 GLU A:57 A:57 28.0 0.147 E -145.0 137.7 28.0 0.147 0.0 NAG
 6.003
 OE1
 O7
1s78 1 P04626 100.0 0.0 X-RAY
 2004-04-27 GLU A:57 A:57 26.0 0.137 E -137.5 130.2 26.0 0.137 0.0 NAG
NAG
 6.305
9.653
 OE1
OE1
 C8
O6
GLU B:57 B:57 28.0 0.147 E -135.4 130.5 NA NA NA
3be1 1 P04626 100.0 0.0 X-RAY
 2008-11-18 GLU A:57 A:57 30.0 0.158 E -132.1 145.4 30.0 0.158 0.0 NAG
 4.311
 OE2
 O7
3mzw 1 P04626 100.0 0.0 X-RAY
 2010-07-28 GLU A:57 A:57 28.0 0.147 E -138.0 136.4 28.0 0.147 0.0 NAG
NAG
HOH
 6.535
9.572
4.908
 OE1
N
OE2
 N2
O6
O
3n85 1 P04626 100.0 0.0 X-RAY
 2010-07-28 GLU A:57 A:57 25.0 0.132 E -158.1 130.6 25.0 0.132 0.0 NAG
 4.761
 OE1
 O7
5my6 1 P04626 100.0 0.0 X-RAY
 2017-08-09 GLU A:56 A:79 27.0 0.142 E -134.4 140.3 27.0 0.142 0.0 NAG
NAG
HOH
 4.062
9.587
2.500
 OE2
OE2
OE1
 C8
O6
O
6oge 1 P04626 100.0 0.0 EM
 2019-05-15 GLU A:57 A:79 19.0 0.1 E -153.3 139.3 19.0 0.1 0.0 NAG
 7.001
 OE1
 O7
6j71 1 P04626 100.0 0.0 X-RAY
 2019-02-27 GLU A:58 A:79 37.0 0.195 E -118.1 149.5 37.0 0.195 0.0 NAG
 5.013
 OE2
 O7
1n8z 3 P04626 100.0 0.0 X-RAY
 2003-02-18 GLU C:57 C:57 29.0 0.153 E -139.3 130.8 29.0 0.153 0.0 NAG
HOH
 3.971
2.596
 OE1
OE1
 O7
O
5k33 2 P04626 100.0 0.0 X-RAY
 2017-04-12 GLU B:57 C:57 35.0 0.184 E -117.6 145.3 35.0 0.184 0.0 NAG
NAG
 4.867
9.399
 OE2
HG3
 HN2
HN2
5o4g 1 P04626 100.0 0.0 X-RAY
 2018-05-16 GLU A:57 C:57 25.0 0.132 E -129.7 137.0 25.0 0.132 0.0 NAG
 5.636
 OE2
 O7
3wlw 1 P04626 100.0 0.0 X-RAY
 2015-05-27 GLU A:57 A:57 33.0 0.174 E -104.0 154.0 33.0 0.174 0.0 NAG
HOH
 5.220
5.683
 OE1
OE2
 O7
O
GLU B:57 B:57 36.0 0.189 E -113.4 153.8 NA NA NA
3wsq 1 P04626 100.0 0.0 X-RAY
 2015-03-25 GLU A:57 A:57 22.0 0.116 -57.0 156.8 22.0 0.116 0.0
1n8y 1 22651765 85.53 0.0 X-RAY
 2003-02-18 GLU A:57 C:57 24.0 0.126 E -154.8 135.8 24.0 0.126 0.0 NAG
HOH
 6.052
2.521
 OE2
OE2
 O7
O
2a91 1 P04626 99.61 0.0 X-RAY
 2005-07-26 GLU A:58 A:58 29.0 0.153 E -141.8 149.8 29.0 0.153 0.0 NAG
HOH
 5.043
2.503
 OE1
OE2
 O7
O
4hrl 1 P04626 98.47 3e-130 X-RAY
 2013-10-16 GLU A:57 C:57 36.0 0.189 E -116.0 150.4 36.0 0.189 0.0 HOH
 7.255
 N
 O
4hrm 1 P04626 98.47 3e-130 X-RAY
 2013-10-16 GLU A:57 C:57 60.0 0.316 E -171.2 116.5 60.0 0.316 0.0
GLU B:57 A:57 114.0 0.6 E -138.3 134.5 114.0 0.6 0.0
3h3b 1 P04626 99.48 3e-130 X-RAY
 2010-04-28 GLU A:59 A:57 20.0 0.105 E -146.8 149.8 20.0 0.105 0.0 HOH
 5.585
 OE2
 O
GLU B:59 B:57 37.0 0.195 E -148.9 139.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04626-f1 1 P04626 100.0 0.0 GLU A:79 A:79 25.0 0.132 E -132.5 144.3