Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 47590283 | . | A | C | CCDS11549.1:NM_002507.3:c.1196gAc>gCc_NP_002498.1:p.399D>A | Homo sapiens nerve growth factor receptor (NGFR), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2n83 | 1 | P08138 | 100.0 | 1e-63 |
NMR |
2015-12-23 | ASP | A:70 | A:399 | 140.0 | 0.933 | H | -59.3 | -40.5 | 85.0 | 0.567 | 0.366 |
B:O43353:0.367 |
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2n97 | 1 | P08138 | 100.0 | 1e-63 |
NMR |
2015-12-23 | ASP | A:70 | A:399 | 116.0 | 0.773 | H | -56.3 | -43.5 | 116.0 | 0.773 | 0.0 | ||||||
ASP | B:70 | B:399 | 113.0 | 0.753 | H | -56.7 | -42.9 | 113.0 | 0.753 | 0.0 | |||||||||||||
7csq | 1 | P08138 | 100.0 | 1e-63 |
NMR |
2021-08-25 | ASP | A:70 | A:399 | 59.0 | 0.393 | H | -58.4 | -41.4 | 59.0 | 0.393 | 0.0 | ||||||
2n80 | 1 | P08138 | 100.0 | 2e-60 |
NMR |
2015-12-23 | ASP | A:66 | A:399 | 123.0 | 0.82 | H | -55.5 | -38.9 | 123.0 | 0.82 | 0.0 | ||||||
4f42 | 1 | P07174 | 89.77 | 7e-40 |
X-RAY |
2013-05-15 | ASP | A:65 | A:65 | 83.0 | 0.553 | H | -64.8 | -36.9 | 83.0 | 0.553 | 0.0 |
MNB HOH |
7.566 5.181 |
N O |
C4 O |
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4f44 | 1 | P07174 | 89.77 | 7e-40 |
X-RAY |
2013-05-15 | ASP | A:65 | A:65 | 96.0 | 0.64 | H | -73.2 | -31.5 | 96.0 | 0.64 | 0.0 |
MNB HOH |
7.820 5.213 |
N O |
C4 O |
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ASP | B:65 | B:65 | 95.0 | 0.633 | H | -70.4 | -37.8 | 95.0 | 0.633 | 0.0 |
MNB HOH |
7.763 3.018 |
N OD1 |
C4 O |
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3ewv | 2 | P08138 | 100.0 | 1.0 |
X-RAY |
2009-10-20 | ASP | B:4 | E:397 | 126.0 | 0.84 | H | -43.8 | -57.5 | 78.0 | 0.52 | 0.32 |
A:P62158:0.32 |
HOH |
2.589 |
OD2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p08138-f1 | 1 | P08138 | 100.0 | 0.0 | ASP | A:399 | A:399 | 84.0 | 0.56 | H | -61.1 | -39.4 |