Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 47590283 . A C CCDS11549.1:NM_002507.3:c.1196gAc>gCc_NP_002498.1:p.399D>A Homo sapiens nerve growth factor receptor (NGFR), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2n83 1 P08138 100.0 1e-63 NMR
2015-12-23 ASP A:70 A:399 140.0 0.933 H -59.3 -40.5 85.0 0.567 0.366 B:O43353:0.367
2n97 1 P08138 100.0 1e-63 NMR
2015-12-23 ASP A:70 A:399 116.0 0.773 H -56.3 -43.5 116.0 0.773 0.0
ASP B:70 B:399 113.0 0.753 H -56.7 -42.9 113.0 0.753 0.0
7csq 1 P08138 100.0 1e-63 NMR
2021-08-25 ASP A:70 A:399 59.0 0.393 H -58.4 -41.4 59.0 0.393 0.0
2n80 1 P08138 100.0 2e-60 NMR
2015-12-23 ASP A:66 A:399 123.0 0.82 H -55.5 -38.9 123.0 0.82 0.0
4f42 1 P07174 89.77 7e-40 X-RAY
2013-05-15 ASP A:65 A:65 83.0 0.553 H -64.8 -36.9 83.0 0.553 0.0 MNB
HOH
7.566
5.181
N
O
C4
O
4f44 1 P07174 89.77 7e-40 X-RAY
2013-05-15 ASP A:65 A:65 96.0 0.64 H -73.2 -31.5 96.0 0.64 0.0 MNB
HOH
7.820
5.213
N
O
C4
O
ASP B:65 B:65 95.0 0.633 H -70.4 -37.8 95.0 0.633 0.0 MNB
HOH
7.763
3.018
N
OD1
C4
O
3ewv 2 P08138 100.0 1.0 X-RAY
2009-10-20 ASP B:4 E:397 126.0 0.84 H -43.8 -57.5 78.0 0.52 0.32 A:P62158:0.32
HOH
2.589
OD2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p08138-f1 1 P08138 100.0 0.0 ASP A:399 A:399 84.0 0.56 H -61.1 -39.4