Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 56356533 | . | G | A | CCDS11604.1:NM_000250.1:c.721Cag>Tag_NP_000241.1:p.241Q>* | Homo sapiens myeloperoxidase (MPO), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6bmt | 1 | P05164 | 100.0 | 0.0 |
X-RAY |
2018-01-03 | GLN | A:241 | A:241 | 110.0 | 0.611 | G | -95.3 | 15.5 | 110.0 | 0.611 | 0.0 |
HOH |
7.387 |
N |
O |
||
5mfa | 1 | P05164 | 100.0 | 0.0 |
X-RAY |
2017-04-05 | GLN | A:193 | A:241 | 114.0 | 0.633 | G | -90.7 | -1.6 | 114.0 | 0.633 | 0.0 |
HOH |
1.723 |
HE22 |
O |
||
5uzu | 2 | P05164 | 100.0 | 0.0 |
X-RAY |
2017-07-26 | GLN | B:75 | A:241 | 119.0 | 0.661 | G | -84.9 | 9.6 | 119.0 | 0.661 | 0.0 |
HOH |
2.391 |
OE1 |
O |
||
6azp | 1 | P05164 | 100.0 | 0.0 |
X-RAY |
2017-12-27 | GLN | A:75 | A:241 | 117.0 | 0.65 | G | -93.5 | -2.5 | 117.0 | 0.65 | 0.0 |
HOH |
2.569 |
OE1 |
O |
||
3f9p | 1 | P05164 | 100.0 | 1e-76 |
X-RAY |
2009-07-14 | GLN | A:77 | A:75 | 138.0 | 0.767 | G | -94.5 | 3.4 | 118.0 | 0.656 | 0.111 |
B:P05164:0.111 |
|||||
GLN | C:77 | B:75 | 137.0 | 0.761 | G | -101.6 | 4.3 | NA | NA | NA | |||||||||||||
3zs1 | 1 | P05164 | 100.0 | 1e-76 |
X-RAY |
2011-08-31 | GLN | A:77 | A:75 | 128.0 | 0.711 | G | -85.7 | -2.3 | NA | NA | NA | ||||||
GLN | B:77 | B:75 | 133.0 | 0.739 | G | -83.6 | 5.4 | 110.0 | 0.611 | 0.128 |
D:P05164:0.128 |
HOH |
5.347 |
N |
O |
||||||||
4ejx | 2 | P05164 | 100.0 | 1e-76 |
X-RAY |
2013-04-10 | GLN | B:77 | B:75 | 130.0 | 0.722 | G | -83.6 | 5.4 | 108.0 | 0.6 | 0.122 |
C:P05164:0.122 |
|||||
1mhl | 1 | P05164 | 100.0 | 3e-72 |
X-RAY |
1996-01-06 | GLN | A:77 | A:75 | 125.0 | 0.694 | G | -95.1 | 0.6 | 107.0 | 0.594 | 0.1 |
B:P05164:0.1 |
HOH |
5.090 |
O |
O |
|
GLN | C:77 | B:75 | 129.0 | 0.717 | G | -99.5 | 6.1 | 100.0 | 0.556 | 0.161 |
D:P05164:0.161 |
HOH |
5.016 |
O |
O |
||||||||
1myp | 1 | P05164 | 100.0 | 3e-72 |
X-RAY |
1994-01-31 | GLN | A:77 | A:75 | 135.0 | 0.75 | G | -102.6 | 41.5 | 119.0 | 0.661 | 0.089 |
B:P05164:0.089 |
|||||
GLN | C:77 | B:75 | 131.0 | 0.728 | S | -93.0 | 2.7 | 108.0 | 0.6 | 0.128 |
D:P05164:0.128 |
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3zs0 | 1 | P05164 | 100.0 | 3e-72 |
X-RAY |
2011-08-31 | GLN | A:77 | A:75 | 128.0 | 0.711 | G | -91.5 | -6.7 | 109.0 | 0.606 | 0.105 |
C:P05164:0.106 |
SO4 HOH |
8.412 4.783 |
N O |
O2 O |
|
GLN | B:77 | B:75 | 130.0 | 0.722 | G | -90.3 | -2.7 | 109.0 | 0.606 | 0.116 |
D:P05164:0.117 |
SO4 HOH |
8.818 2.812 |
N NE2 |
O4 O |
||||||||
4c1m | 1 | P05164 | 100.0 | 3e-72 |
X-RAY |
2013-11-13 | GLN | A:77 | A:75 | 130.0 | 0.722 | G | -90.3 | -2.7 | NA | NA | NA | ||||||
GLN | B:77 | B:75 | 135.0 | 0.75 | G | -84.6 | -1.2 | 114.0 | 0.633 | 0.117 |
D:P05164:0.117 |
SO4 HOH |
8.056 3.675 |
N CB |
O3 O |
||||||||
5fiw | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2015-10-14 | GLN | A:75 | A:75 | 138.0 | 0.767 | G | -81.7 | -8.1 | 113.0 | 0.628 | 0.139 |
C:P05164:0.139 |
HOH |
2.466 |
OE1 |
O |
|
GLN | B:75 | B:75 | 129.0 | 0.717 | G | -82.4 | -8.6 | NA | NA | NA | |||||||||||||
5qj2 | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2019-02-06 | GLN | A:75 | A:75 | 138.0 | 0.767 | G | -75.5 | -12.9 | 115.0 | 0.639 | 0.128 |
B:P05164:0.128 |
|||||
GLN | C:75 | D:75 | 141.0 | 0.783 | G | -136.7 | -25.1 | NA | NA | NA | |||||||||||||
GLN | E:75 | F:75 | 141.0 | 0.783 | G | -75.8 | -3.4 | NA | NA | NA | |||||||||||||
GLN | G:75 | H:75 | 132.0 | 0.733 | T | -53.0 | -31.2 | NA | NA | NA | |||||||||||||
5qj3 | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2019-02-06 | GLN | A:75 | A:75 | 132.0 | 0.733 | G | -93.7 | 2.3 | 115.0 | 0.639 | 0.094 |
B:P05164:0.094 |
HOH |
7.708 |
NE2 |
O |
|
GLN | C:75 | D:75 | 144.0 | 0.8 | G | -80.1 | -2.0 | NA | NA | NA | |||||||||||||
5wdj | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2018-04-18 | GLN | A:75 | A:75 | 118.0 | 0.656 | G | -78.5 | -10.8 | 98.0 | 0.544 | 0.112 |
B:P05164:0.111 |
HOH |
4.676 |
O |
O |
|
GLN | C:75 | D:75 | 127.0 | 0.706 | G | -90.8 | -2.7 | 105.0 | 0.583 | 0.123 |
D:P05164:0.122 |
HOH |
2.878 |
OE1 |
O |
||||||||
6wxz | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2020-10-14 | GLN | A:75 | A:75 | 135.0 | 0.75 | G | -90.3 | 9.3 | 118.0 | 0.656 | 0.094 |
B:P05164:0.094 |
HOH |
4.099 |
OE1 |
O |
|
GLN | C:75 | D:75 | 147.0 | 0.817 | G | -88.3 | 8.4 | NA | NA | NA | |||||||||||||
6wy0 | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2020-10-14 | GLN | A:75 | A:75 | 121.0 | 0.672 | G | -87.0 | -15.4 | 103.0 | 0.572 | 0.1 |
B:P05164:0.1 |
HOH |
8.452 |
CG |
O |
|
GLN | C:75 | D:75 | 132.0 | 0.733 | G | -87.7 | -14.2 | NA | NA | NA | |||||||||||||
GLN | E:75 | F:75 | 117.0 | 0.65 | G | -88.9 | -14.7 | NA | NA | NA | |||||||||||||
GLN | G:75 | H:75 | 127.0 | 0.706 | G | -109.1 | -13.5 | NA | NA | NA | |||||||||||||
6wy5 | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2020-10-14 | GLN | A:75 | A:75 | 123.0 | 0.683 | G | -84.0 | 14.1 | 109.0 | 0.606 | 0.077 |
B:P05164:0.078 |
|||||
GLN | C:75 | D:75 | 141.0 | 0.783 | G | -92.8 | 13.3 | NA | NA | NA | |||||||||||||
6wy7 | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2020-10-14 | GLN | A:75 | A:75 | 125.0 | 0.694 | G | -81.7 | -13.9 | 104.0 | 0.578 | 0.116 |
B:P05164:0.117 |
HOH |
2.905 |
OE1 |
O |
|
GLN | C:75 | D:75 | 126.0 | 0.7 | G | -81.4 | -14.8 | NA | NA | NA | |||||||||||||
6wyd | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2020-10-14 | GLN | A:75 | A:75 | 137.0 | 0.761 | G | -75.0 | -15.3 | 116.0 | 0.644 | 0.117 |
B:P05164:0.117 |
HOH |
4.662 |
O |
O |
|
GLN | C:75 | D:75 | 133.0 | 0.739 | G | -66.1 | -10.6 | NA | NA | NA | |||||||||||||
GLN | E:75 | F:75 | 133.0 | 0.739 | G | -91.4 | -14.8 | NA | NA | NA | |||||||||||||
GLN | G:75 | H:75 | 77.0 | NA | G | -70.6 | -0.5 | NA | NA | NA | |||||||||||||
7lae | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2021-04-21 | GLN | A:75 | A:75 | 131.0 | 0.728 | G | -70.3 | -10.8 | 118.0 | 0.656 | 0.072 |
B:P05164:0.072 |
|||||
GLN | C:75 | D:75 | 64.0 | NA | T | -68.2 | -23.2 | NA | NA | NA | |||||||||||||
7lag | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2021-04-21 | GLN | A:75 | A:75 | 129.0 | 0.717 | G | -80.2 | -15.6 | 113.0 | 0.628 | 0.089 |
B:P05164:0.089 |
|||||
GLN | C:75 | D:75 | 125.0 | 0.694 | G | -82.0 | -13.4 | NA | NA | NA | |||||||||||||
GLN | E:75 | F:75 | 127.0 | 0.706 | G | -81.6 | -14.5 | NA | NA | NA | |||||||||||||
GLN | G:75 | H:75 | 133.0 | 0.739 | G | -82.2 | -12.6 | NA | NA | NA | |||||||||||||
7lal | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2021-04-21 | GLN | A:75 | A:75 | 143.0 | 0.794 | G | -69.6 | 19.0 | 128.0 | 0.711 | 0.083 |
B:P05164:0.083 |
|||||
GLN | C:75 | D:75 | 148.0 | 0.822 | G | -58.2 | -9.2 | NA | NA | NA | |||||||||||||
7lan | 1 | P05164 | 100.0 | 5e-70 |
X-RAY |
2021-04-21 | GLN | A:75 | A:75 | 129.0 | 0.717 | G | -80.3 | -14.1 | 110.0 | 0.611 | 0.106 |
B:P05164:0.106 |
HOH |
3.095 |
O |
O |
|
GLN | C:75 | D:75 | 126.0 | 0.7 | G | -79.6 | -16.7 | NA | NA | NA | |||||||||||||
GLN | E:75 | F:75 | 127.0 | 0.706 | G | -80.1 | -15.3 | NA | NA | NA | |||||||||||||
GLN | G:75 | H:75 | 61.0 | NA | G | -79.3 | -16.2 | NA | NA | NA | |||||||||||||
1cxp | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2000-04-24 | GLN | A:75 | A:75 | 130.0 | 0.722 | G | -88.3 | -4.6 | 108.0 | 0.6 | 0.122 |
B:P05164:0.122 |
SO4 HOH |
8.362 2.839 |
N O |
O2 O |
|
GLN | C:75 | B:75 | 131.0 | 0.728 | G | -83.9 | -10.3 | 110.0 | 0.611 | 0.117 |
D:P05164:0.117 |
SO4 HOH |
8.221 2.849 |
N NE2 |
O2 O |
||||||||
1d2v | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2000-04-24 | GLN | A:75 | A:75 | 127.0 | 0.706 | G | -86.9 | -8.7 | 107.0 | 0.594 | 0.112 |
B:P05164:0.111 |
SO4 HOH |
8.150 2.906 |
N OE1 |
O2 O |
|
GLN | C:75 | B:75 | 132.0 | 0.733 | G | -82.2 | -13.6 | 107.0 | 0.594 | 0.139 |
D:P05164:0.139 |
SO4 HOH |
8.005 2.549 |
N NE2 |
O2 O |
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1d5l | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2001-12-12 | GLN | A:75 | A:75 | 125.0 | 0.694 | G | -88.0 | -6.1 | 103.0 | 0.572 | 0.122 |
B:P05164:0.122 |
SO4 HOH |
8.256 2.799 |
N OE1 |
O2 O |
|
GLN | C:75 | B:75 | 128.0 | 0.711 | G | -84.6 | -6.8 | 103.0 | 0.572 | 0.139 |
D:P05164:0.139 |
SO4 HOH |
8.329 2.637 |
N OE1 |
O2 O |
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1d7w | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2001-12-12 | GLN | A:75 | A:75 | 125.0 | 0.694 | G | -92.5 | -9.2 | 105.0 | 0.583 | 0.111 |
B:P05164:0.111 |
SO4 HOH |
8.235 2.936 |
N OE1 |
O2 O |
|
GLN | C:75 | B:75 | 134.0 | 0.744 | G | -84.6 | -1.6 | 114.0 | 0.633 | 0.111 |
D:P05164:0.111 |
SO4 HOH |
8.959 2.609 |
N NE2 |
O4 O |
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1dnu | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2001-12-21 | GLN | A:75 | A:75 | 128.0 | 0.711 | G | -91.0 | -4.1 | 108.0 | 0.6 | 0.111 |
B:P05164:0.111 |
SO4 HOH |
8.241 2.969 |
N O |
O2 O |
|
GLN | C:75 | B:75 | 131.0 | 0.728 | G | -89.4 | -8.4 | 105.0 | 0.583 | 0.145 |
D:P05164:0.144 |
SO4 HOH |
8.618 2.693 |
N OE1 |
O2 O |
||||||||
1dnw | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2001-12-21 | GLN | A:75 | A:75 | 126.0 | 0.7 | G | -90.9 | -10.3 | 105.0 | 0.583 | 0.117 |
B:P05164:0.117 |
SO4 HOH |
8.219 2.929 |
N OE1 |
O2 O |
|
GLN | C:75 | B:75 | 127.0 | 0.706 | G | -85.2 | -6.0 | 101.0 | 0.561 | 0.145 |
D:P05164:0.144 |
SO4 HOH |
8.186 2.532 |
N OE1 |
O2 O |
||||||||
4dl1 | 1 | P05164 | 100.0 | 2e-69 |
X-RAY |
2012-03-21 | GLN | A:75 | A:75 | 135.0 | 0.75 | G | -94.0 | -7.8 | 111.0 | 0.617 | 0.133 |
B:P05164:0.133 |
HOH |
2.736 |
OE1 |
O |
|
GLN | C:75 | B:75 | 125.0 | 0.694 | G | -84.0 | -11.8 | 108.0 | 0.6 | 0.094 |
D:P05164:0.094 |
HOH |
4.421 |
O |
O |
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GLN | E:75 | E:75 | 134.0 | 0.744 | G | -97.6 | 3.2 | NA | NA | NA | |||||||||||||
GLN | G:75 | F:75 | 121.0 | 0.672 | G | -94.5 | -0.1 | NA | NA | NA | |||||||||||||
GLN | I:75 | I:75 | 132.0 | 0.733 | G | -103.2 | -3.4 | NA | NA | NA | |||||||||||||
GLN | K:75 | J:75 | 126.0 | 0.7 | G | -84.0 | -4.3 | NA | NA | NA | |||||||||||||
GLN | M:75 | M:75 | 141.0 | 0.783 | G | -110.8 | 14.0 | NA | NA | NA | |||||||||||||
GLN | O:75 | N:75 | 137.0 | 0.761 | G | -92.8 | -16.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p05164-f1 | 1 | P05164 | 100.0 | 0.0 | GLN | A:241 | A:241 | 98.0 | 0.544 | G | -86.4 | -1.4 |