Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 8926061 . A C CCDS11148.1:NM_004822.2:c.371aAc>aCc_NP_004813.2:p.124N>T Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ASN A:102 A:124 26.0 0.163 S -106.6 178.2 26.0 0.163 0.0 HOH
 2.514
 O
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ASN A:103 A:124 34.0 0.212 S -64.4 136.2 34.0 0.212 0.0
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ASN A:103 A:124 32.0 0.2 S -67.8 138.2 32.0 0.2 0.0 YYJ
 9.377
 OD1
 O1S6
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ASN A:100 A:124 32.0 0.2 S -64.4 136.2 32.0 0.2 0.0
ASN F:100 G:124 32.0 0.2 S -64.4 136.2 32.0 0.2 0.0
ASN I:100 D:124 33.0 0.206 S -64.4 136.2 33.0 0.206 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ASN A:86 A:124 22.0 0.138 S -79.1 128.2 22.0 0.138 0.0
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ASN A:86 A:124 25.0 0.156 S -141.9 -62.4 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 SER A:101 A:126 26.0 0.226 S -116.7 162.3 26.0 0.226 0.0 HOH
 4.315
 C
 O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 SER A:101 A:126 14.0 0.122 S -64.9 -59.6 14.0 0.122 0.0
SER B:101 B:126 16.0 0.139 S -72.4 127.3 16.0 0.139 0.0
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 SER B:101 A:126 18.0 0.157 S -77.4 163.6 18.0 0.157 0.0 HOH
 8.586
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ASN A:124 A:124 32.0 0.2 T -73.0 147.2