Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 8926079 | . | A | C | CCDS11148.1:NM_004822.2:c.389cAc>cCc_NP_004813.2:p.130H>P | Homo sapiens netrin 1 (NTN1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4ove | 1 | O09118 | 99.31 | 0.0 |
X-RAY |
2015-02-25 | HIS | A:108 | A:130 | 23.0 | 0.118 | -158.0 | 168.5 | 23.0 | 0.118 | 0.0 |
NAG NAG HOH |
3.748 9.391 2.979 |
CA O N |
C8 C1 O |
|||
| 7ne0 | 1 | O95631 | 100.0 | 0.0 |
X-RAY |
2021-03-31 | HIS | A:109 | A:130 | 121.0 | 0.621 | S | -57.7 | 139.2 | 121.0 | 0.621 | 0.0 |
NAG |
5.832 |
C |
O5 |
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| 7ne1 | 1 | O95631 | 100.0 | 0.0 |
X-RAY |
2021-03-31 | HIS | A:109 | A:130 | 122.0 | 0.626 | -66.8 | 137.0 | 122.0 | 0.626 | 0.0 |
NAG |
3.742 |
CD2 |
C8 |
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| 7ndg | 1 | O95631 | 100.0 | 0.0 |
EM |
2021-03-31 | HIS | A:106 | A:130 | 120.0 | 0.615 | S | -57.8 | 139.2 | 120.0 | 0.615 | 0.0 |
NAG |
5.832 |
C |
O5 |
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| HIS | F:106 | G:130 | 121.0 | 0.621 | S | -57.8 | 139.2 | 121.0 | 0.621 | 0.0 |
NAG |
5.832 |
C |
O5 |
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| HIS | I:106 | D:130 | 120.0 | 0.615 | S | -57.7 | 139.3 | 120.0 | 0.615 | 0.0 |
NAG |
5.832 |
C |
O5 |
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| 6fkq | 1 | O95631 | 100.0 | 0.0 |
X-RAY |
2018-03-21 | HIS | A:92 | A:130 | 104.0 | 0.533 | -30.6 | 124.7 | 104.0 | 0.533 | 0.0 |
NAG NAG |
4.420 9.554 |
N N |
C8 O6 |
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| 4urt | 1 | O95631 | 100.0 | 0.0 |
X-RAY |
2014-09-10 | HIS | A:92 | A:130 | 120.0 | 0.615 | -63.2 | 126.0 | NA | NA | NA | |||||||
| 4plm | 1 | Q90922 | 90.74 | 0.0 |
X-RAY |
2014-06-18 | HIS | A:107 | A:132 | 105.0 | 0.538 | 155.6 | 134.0 | 105.0 | 0.538 | 0.0 |
NAG HOH |
5.368 3.561 |
C NE2 |
C1 O |
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| 4pln | 1 | Q90922 | 90.74 | 0.0 |
X-RAY |
2014-06-18 | HIS | A:107 | A:132 | 123.0 | 0.631 | -84.2 | 156.1 | 123.0 | 0.631 | 0.0 |
NAG |
3.892 |
CA |
O6 |
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| HIS | B:107 | B:132 | 129.0 | 0.662 | -76.4 | 156.5 | 129.0 | 0.662 | 0.0 |
NAG |
3.637 |
CA |
O6 |
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| 4plo | 2 | Q90922 | 90.74 | 0.0 |
X-RAY |
2014-06-18 | HIS | B:107 | A:132 | 95.0 | 0.487 | -86.3 | 144.1 | 95.0 | 0.487 | 0.0 |
NAG HOH |
5.714 2.508 |
C O |
O5 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o95631-f1 | 1 | O95631 | 100.0 | 0.0 | HIS | A:130 | A:130 | 141.0 | 0.723 | S | -85.6 | 79.7 | |