Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 8926321 . C A CCDS11148.1:NM_004822.2:c.631Cgc>Agc_NP_004813.2:p.211R>S Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ARG A:189 A:211 69.0 0.307 -66.2 109.5 69.0 0.307 0.0 HOH
 2.959
 CG
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:190 A:211 126.0 0.56 -88.5 126.6 126.0 0.56 0.0 SO4
 4.409
 O
 O1
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:190 A:211 138.0 0.613 -89.2 134.2 138.0 0.613 0.0 NO3
 5.338
 O
 O3
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ARG A:187 A:211 128.0 0.569 -88.4 126.7 128.0 0.569 0.0
ARG F:187 G:211 128.0 0.569 -88.4 126.7 128.0 0.569 0.0
ARG I:187 D:211 129.0 0.573 -88.5 126.7 129.0 0.573 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ARG A:173 A:211 122.0 0.542 -59.0 -64.7 122.0 0.542 0.0 SO4
SO4
 6.890
3.156
 N
NH2
 O4
O3
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ARG A:173 A:211 215.0 0.956 S -54.9 -43.2 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:188 A:213 137.0 0.609 S -62.4 160.5 137.0 0.609 0.0 CL
HOH
 6.668
3.549
 O
NH1
 CL
O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:188 A:213 126.0 0.56 -104.4 174.1 126.0 0.56 0.0
ARG B:188 B:213 105.0 0.467 -110.1 154.8 105.0 0.467 0.0
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG B:188 A:213 125.0 0.556 -107.8 127.9 125.0 0.556 0.0 SO4
HOH
 4.634
7.238
 O
C
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ARG A:211 A:211 157.0 0.698 -84.6 147.4