Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 8926577 . G A CCDS11148.1:NM_004822.2:c.887cGc>cAc_NP_004813.2:p.296R>H Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ARG A:274 A:296 131.0 0.582 E -89.8 113.1 131.0 0.582 0.0 HOH
 4.925
 NH1
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:275 A:296 126.0 0.56 E -75.2 127.8 126.0 0.56 0.0
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:275 A:296 132.0 0.587 E -71.4 131.2 132.0 0.587 0.0 NO3
 7.134
 NH1
 O1
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ARG A:272 A:296 126.0 0.56 E -75.2 127.7 126.0 0.56 0.0
ARG F:272 G:296 127.0 0.564 E -75.1 127.7 127.0 0.564 0.0
ARG I:272 D:296 126.0 0.56 E -75.1 127.8 126.0 0.56 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ARG A:258 A:296 154.0 0.684 E -71.8 151.5 154.0 0.684 0.0 SO4
 4.894
 CD
 O3
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ARG A:258 A:296 145.0 0.644 E -100.8 128.7 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:273 A:298 135.0 0.6 E -97.0 140.2 135.0 0.6 0.0 HOH
 2.835
 NH1
 O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:273 A:298 142.0 0.631 E -82.7 132.4 142.0 0.631 0.0
ARG B:273 B:298 149.0 0.662 E -87.6 129.0 149.0 0.662 0.0
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG B:273 A:298 133.0 0.591 E -82.7 148.5 133.0 0.591 0.0 HOH
 3.634
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ARG A:296 A:296 128.0 0.569 E -78.1 132.7