Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 9066148 . A C CCDS11148.1:NM_004822.2:c.1037cAt>cCt_NP_004813.2:p.346H>P Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 HIS A:324 A:346 2.0 0.01 -119.5 5.8 2.0 0.01 0.0 HOH
 3.274
 CE1
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 HIS A:325 A:346 0.0 0.0 S -120.8 -16.1 0.0 0.0 0.0
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 HIS A:325 A:346 1.0 0.005 -119.2 -7.8 1.0 0.005 0.0
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 HIS A:322 A:346 25.0 0.128 S -120.8 -16.1 25.0 0.128 0.0
HIS F:322 G:346 25.0 0.128 S -120.9 -16.0 25.0 0.128 0.0
HIS I:322 D:346 15.0 0.077 S -120.7 -16.0 15.0 0.077 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 HIS A:308 A:346 12.0 0.062 T -115.8 -32.3 12.0 0.062 0.0
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 HIS A:308 A:346 0.0 0.0 S -127.1 12.9 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 HIS A:323 A:348 0.0 0.0 S -106.8 -1.7 0.0 0.0 0.0 HOH
 4.932
 N
 O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 HIS A:323 A:348 6.0 0.031 S -101.2 -5.5 1.0 0.005 0.026 B:Q90922:0.026
HIS B:323 B:348 4.0 0.021 S -100.9 -6.2 0.0 0.0 0.021 A:Q90922:0.021
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 HIS B:323 A:348 1.0 0.005 S -96.8 -6.1 1.0 0.005 0.0 SO4
HOH
 6.219
4.134
 O
N
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 HIS A:346 A:346 2.0 0.01 S -112.7 -7.9