Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 9066196 . G A CCDS11148.1:NM_004822.2:c.1085cGc>cAc_NP_004813.2:p.362R>H Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ARG A:340 A:362 153.0 0.68 S 56.4 37.0 153.0 0.68 0.0 HOH
 8.303
 O
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:341 A:362 185.0 0.822 S 56.8 42.0 185.0 0.822 0.0 GU4
YYJ
 2.899
3.750
 NH1
NH2
 O22
O1S1
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:341 A:362 156.0 0.693 S 58.3 42.7 156.0 0.693 0.0
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ARG A:338 A:362 190.0 0.844 S 56.8 42.0 190.0 0.844 0.0
ARG F:338 G:362 187.0 0.831 S 56.8 41.9 187.0 0.831 0.0
ARG I:338 D:362 187.0 0.831 S 56.7 42.0 187.0 0.831 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ARG A:324 A:362 156.0 0.693 S 59.4 29.3 156.0 0.693 0.0
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ARG A:324 A:362 159.0 0.707 S 53.2 64.8 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:339 A:364 134.0 0.596 S 58.5 40.8 134.0 0.596 0.0 HOH
 2.684
 NE
 O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:339 A:364 133.0 0.591 S 59.8 51.3 124.0 0.551 0.04 B:Q90922:0.04
ARG B:339 B:364 146.0 0.649 S 58.5 52.1 136.0 0.604 0.045 A:Q90922:0.044
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG B:339 A:364 150.0 0.667 S 65.6 31.0 150.0 0.667 0.0 HOH
 6.371
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ARG A:362 A:362 185.0 0.822 S 61.6 35.1