Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 9066226 . G A CCDS11148.1:NM_004822.2:c.1115cGc>cAc_NP_004813.2:p.372R>H Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ARG A:350 A:372 95.0 0.422 -123.6 -20.5 95.0 0.422 0.0 HOH
 2.577
 N
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:351 A:372 111.0 0.493 -91.4 173.5 111.0 0.493 0.0
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:351 A:372 86.0 0.382 S -80.2 176.6 86.0 0.382 0.0
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ARG A:348 A:372 111.0 0.493 -91.4 173.5 111.0 0.493 0.0
ARG F:348 G:372 112.0 0.498 -91.4 173.5 112.0 0.498 0.0
ARG I:348 D:372 111.0 0.493 -91.3 173.6 111.0 0.493 0.0
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ARG A:334 A:372 155.0 0.689 T -82.9 165.4 155.0 0.689 0.0
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ARG A:334 A:372 62.0 0.276 T -77.3 -168.1 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:349 A:374 110.0 0.489 -98.6 -178.8 110.0 0.489 0.0 HOH
 2.596
 NH1
 O
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:349 A:374 158.0 0.702 -95.9 -169.9 84.0 0.373 0.329 B:Q90922:0.329
ARG B:349 B:374 167.0 0.742 -91.7 -170.3 76.0 0.338 0.404 A:Q90922:0.404
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG B:349 A:374 95.0 0.422 -73.8 -175.7 95.0 0.422 0.0 SO4
HOH
 4.938
2.287
 NE
NH1
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ARG A:372 A:372 130.0 0.578 -90.9 -176.7