Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 9083250 . G A CCDS11148.1:NM_004822.2:c.1334cGc>cAc_NP_004813.2:p.445R>H Homo sapiens netrin 1 (NTN1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ove 1 O09118 99.31 0.0 X-RAY
 2015-02-25 ARG A:423 A:445 246.0 1.0 S -115.3 34.9 216.0 0.96 0.04 A:O09118:0.133
 HOH
 8.978
 N
 O
7ne0 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:424 A:445 255.0 1.0 S -77.1 -26.4 255.0 1.0 0.0
7ne1 1 O95631 100.0 0.0 X-RAY
 2021-03-31 ARG A:424 A:445 253.0 1.0 S -73.8 -22.8 253.0 1.0 0.0
7ndg 1 O95631 100.0 0.0 EM
 2021-03-31 ARG A:421 A:445 254.0 1.0 S -77.0 -26.5 167.0 0.742 0.258 G:Q7TQG5:0.387
ARG F:421 G:445 257.0 1.0 S -77.0 -26.4 168.0 0.747 0.253 J:Q7TQG5:0.396
ARG I:421 D:445 254.0 1.0 S -77.3 -26.2 167.0 0.742 0.258 B:Q7TQG5:0.387
6fkq 1 O95631 100.0 0.0 X-RAY
 2018-03-21 ARG A:407 A:445 224.0 0.996 S -86.8 -8.5 158.0 0.702 0.294 B:Q8NBI3:0.293
4urt 1 O95631 100.0 0.0 X-RAY
 2014-09-10 ARG A:407 A:445 222.0 0.987 S -90.1 6.3 NA NA NA
4plm 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:422 A:447 249.0 1.0 S -94.8 5.9 249.0 1.0 0.0
4pln 1 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG A:422 A:447 254.0 1.0 S -95.6 3.4 147.0 0.653 0.347 D:P97798:0.476
ARG B:422 B:447 248.0 1.0 S -95.3 3.1 109.0 0.484 0.516 C:P97798:0.618
4plo 2 Q90922 90.74 0.0 X-RAY
 2014-06-18 ARG B:422 A:447 245.0 1.0 S -82.8 -2.8 173.0 0.769 0.231 A:P70211:0.32
 HOH
 6.378
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95631-f1 1 O95631 100.0 0.0 ARG A:445 A:445 256.0 1.0 S -79.2 -1.5