Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1964859 . C A CCDS11016.1:NM_017575.4:c.4187cGt>cTt_NP_060045.4:p.1396R>L Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ARG A:158 A:1396 95.0 0.422 H -58.2 -44.1 95.0 0.422 0.0 HOH
 2.695
 NE
 O
ARG B:158 B:1396 112.0 0.498 H -59.4 -46.4 NA NA NA
ARG C:158 C:1396 118.0 0.524 H -59.2 -46.1 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ARG A:163 A:163 133.0 0.591 H -60.2 -45.1 133.0 0.591 0.0 HOH
 2.807
 NH2
 O
ARG B:163 B:163 129.0 0.573 H -55.0 -47.2 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ARG A:158 A:1396 91.0 0.404 H -47.6 -51.9 91.0 0.404 0.0 HOH
 3.014
 NE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ARG A:1396 A:1396 88.0 0.391 H -59.4 -45.1