Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1964877 . G A CCDS11016.1:NM_017575.4:c.4169aCg>aTg_NP_060045.4:p.1390T>M Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 THR A:152 A:1390 5.0 0.036 -157.2 152.9 5.0 0.036 0.0 HOH
 3.219
 OG1
 O
THR B:152 B:1390 5.0 0.036 -154.7 156.6 NA NA NA
THR C:152 C:1390 6.0 0.043 -162.1 154.5 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 THR A:157 A:157 7.0 0.05 -158.1 153.5 7.0 0.05 0.0 HOH
 2.803
 O
 O
THR B:157 B:157 6.0 0.043 -161.1 154.5 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 THR A:152 A:1390 6.0 0.043 -160.0 149.0 6.0 0.043 0.0 HOH
 2.677
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 THR A:1390 A:1390 0.0 0.0 -154.8 141.6