Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1968387 . T A CCDS11016.1:NM_017575.4:c.4109gAc>gTc_NP_060045.4:p.1370D>V Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ASP A:132 A:1370 81.0 0.54 G -57.4 -26.2 81.0 0.54 0.0 HOH
 2.788
 OD2
 O
ASP B:132 B:1370 61.0 0.407 G -73.0 -13.2 NA NA NA
ASP C:132 NA:NA DO NA DO DO DO NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ASP A:137 A:137 64.0 0.427 G -65.1 -18.3 64.0 0.427 0.0 HOH
 2.810
 OD1
 O
ASP B:137 B:137 75.0 0.5 G -64.0 -9.7 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ASP A:132 A:1370 81.0 0.54 G -73.1 -7.0 81.0 0.54 0.0 HOH
 2.860
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ASP A:1370 A:1370 110.0 0.733 H -96.8 -13.1