Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1968430 . T A CCDS11016.1:NM_017575.4:c.4066Atc>Ttc_NP_060045.4:p.1356I>F Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ILE A:118 A:1356 6.0 0.034 H -60.9 -47.3 6.0 0.034 0.0 HOH
 3.391
 CD1
 O
ILE B:118 B:1356 3.0 0.017 H -57.1 -47.3 NA NA NA
ILE C:118 C:1356 12.0 0.069 H -66.4 -41.5 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ILE A:123 A:123 4.0 0.023 H -62.1 -45.2 4.0 0.023 0.0 HOH
 3.367
 CD1
 O
ILE B:123 B:123 3.0 0.017 H -64.6 -45.2 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ILE A:118 A:1356 6.0 0.034 H -63.0 -49.4 6.0 0.034 0.0 HOH
 3.456
 CD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ILE A:1356 A:1356 6.0 0.034 H -61.1 -44.0