Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1968866 . C A CCDS11016.1:NM_017575.4:c.3943Gag>Tag_NP_060045.4:p.1315E>* Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 GLU A:77 A:1315 58.0 0.305 H -58.1 -48.8 58.0 0.305 0.0 HOH
 2.720
 O
 O
GLU B:77 B:1315 77.0 0.405 H -59.4 -45.0 NA NA NA
GLU C:77 C:1315 69.0 0.363 H -62.1 -47.4 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 GLU A:82 A:82 65.0 0.342 H -60.9 -40.5 65.0 0.342 0.0 HOH
 2.458
 OE2
 O
GLU B:82 B:82 86.0 0.453 H -64.5 -44.5 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 GLU A:77 A:1315 75.0 0.395 H -56.0 -39.9 75.0 0.395 0.0 HOH
 2.815
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 GLU A:1315 A:1315 96.0 0.505 H -57.5 -48.0