Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1968967 . T A CCDS11016.1:NM_017575.4:c.3842aAt>aTt_NP_060045.4:p.1281N>I Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ASN A:43 A:1281 44.0 0.275 H -57.3 -45.3 44.0 0.275 0.0 HOH
 3.478
 OD1
 O
ASN B:43 B:1281 55.0 0.344 H -59.8 -45.6 NA NA NA
ASN C:43 C:1281 59.0 0.369 H -67.9 -41.4 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ASN A:48 A:48 11.0 0.069 H -60.8 -42.4 11.0 0.069 0.0 HOH
 2.726
 O
 O
ASN B:48 B:48 26.0 0.163 H -59.9 -43.7 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ASN A:43 A:1281 23.0 0.144 H -55.0 -43.0 23.0 0.144 0.0 HOH
 2.732
 ND2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ASN A:1281 A:1281 39.0 0.244 H -67.1 -38.9