Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1972116 . C A CCDS11016.1:NM_017575.4:c.3791cGg>cTg_NP_060045.4:p.1264R>L Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ARG A:26 A:1264 127.0 0.564 H -65.5 -40.9 127.0 0.564 0.0 HOH
 3.857
 CG
 O
ARG B:26 B:1264 103.0 0.458 H -63.6 -41.9 NA NA NA
ARG C:26 C:1264 95.0 0.422 H -52.6 -50.0 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ARG A:31 A:31 158.0 0.702 H -61.2 -40.9 158.0 0.702 0.0 HOH
 2.788
 O
 O
ARG B:31 B:31 147.0 0.653 H -66.3 -37.5 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ARG A:26 A:1264 150.0 0.667 H -58.7 -41.0 150.0 0.667 0.0 HOH
 2.110
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ARG A:1264 A:1264 86.0 0.382 H -63.8 -35.3