Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1972120 . C A CCDS11016.1:NM_017575.4:c.3787Gcg>Tcg_NP_060045.4:p.1263A>S Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 ALA A:25 A:1263 12.0 0.104 H -61.8 -41.6 12.0 0.104 0.0 HOH
 3.610
 CB
 O
ALA B:25 B:1263 8.0 0.07 H -61.6 -42.1 NA NA NA
ALA C:25 C:1263 16.0 0.139 H -64.2 -47.2 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 ALA A:30 A:30 14.0 0.122 H -63.4 -42.5 14.0 0.122 0.0 HOH
 3.367
 O
 O
ALA B:30 B:30 13.0 0.113 H -60.4 -40.4 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 ALA A:25 A:1263 16.0 0.139 H -57.0 -47.2 16.0 0.139 0.0 HOH
 2.951
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 ALA A:1263 A:1263 15.0 0.13 H -59.3 -46.1