Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1972147 . C A CCDS11016.1:NM_017575.4:c.3760Ggc>Tgc_NP_060045.4:p.1254G>C Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 GLY A:16 A:1254 1.0 0.013 H -58.0 -40.4 1.0 0.013 0.0 HOH
 3.100
 CA
 O
GLY B:16 B:1254 1.0 0.013 H -50.7 -41.3 NA NA NA
GLY C:16 C:1254 2.0 0.027 H -56.2 -44.0 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 GLY A:21 A:21 0.0 0.0 H -59.2 -40.8 0.0 0.0 0.0 HOH
 3.141
 CA
 O
GLY B:21 B:21 1.0 0.013 H -63.3 -39.2 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 GLY A:16 A:1254 1.0 0.013 H -51.6 -45.2 1.0 0.013 0.0 HOH
 2.940
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 GLY A:1254 A:1254 2.0 0.027 H -56.0 -37.2