Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 1972183 . C A CCDS11016.1:NM_017575.4:c.3724Gaa>Taa_NP_060045.4:p.1242E>* Homo sapiens SMG6, nonsense mediated mRNA decay factor (SMG6), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hww 1 Q86US8 100.0 4e-120 X-RAY
 2006-11-14 GLU A:4 A:1242 65.0 0.342 E -113.1 106.8 65.0 0.342 0.0 HOH
 6.796
 CB
 O
GLU B:4 B:1242 66.0 0.347 E -114.9 113.7 NA NA NA
GLU C:4 C:1242 78.0 0.411 E -110.2 129.9 NA NA NA
2dok 1 Q86US8 100.0 1e-119 X-RAY
 2007-05-01 GLU A:9 A:9 85.0 0.447 E -88.2 105.5 85.0 0.447 0.0 HOH
 3.256
 OE1
 O
GLU B:9 B:9 56.0 0.295 E -99.5 107.5 NA NA NA
2hwx 1 Q86US8 99.45 8e-119 X-RAY
 2006-11-14 GLU A:4 A:1242 62.0 0.326 E -108.3 108.6 62.0 0.326 0.0 HOH
 5.660
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86us8-f1 1 Q86US8 100.0 0.0 GLU A:1242 A:1242 61.0 0.321 E -86.4 117.9