Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 2341449 . A C CCDS42232.1:NM_024086.3:c.842aTg>aGg_NP_076991.3:p.281M>R Homo sapiens methyltransferase like 16 (METTL16), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6du4 1 Q86W50 100.0 0.0 X-RAY
 2018-09-26 MET A:284 A:281 44.0 0.238 E -96.1 147.1 44.0 0.238 0.0 U
A
C
A
G
A
G
A
A
G
TRS
HOH
 7.917
8.432
6.240
6.208
5.754
3.095
9.414
3.426
3.962
6.756
9.108
3.593
 N
N
N
O
O
N
O
CB
CE
CE
SD
N
 O2
O3'
O2'
OP1
O2'
N7
O5'
O2'
C5'
P
C3
O
6du5 1 Q86W50 100.0 0.0 X-RAY
 2018-09-26 MSE A:284 A:281 47.0 0.254 E -114.9 139.6 47.0 0.254 0.0 G
U
A
C
A
G
A
G
A
A
G
 9.957
8.189
8.195
5.995
6.697
6.062
3.315
9.211
3.480
3.972
7.335
 SE
N
N
N
N
N
O
O
SE
SE
CE
 OP1
O2
O3'
O2'
OP1
O2'
C8
O5'
O2'
C5'
P
6b91 1 Q86W50 100.0 0.0 X-RAY
 2018-04-04 MET A:284 A:281 77.0 0.416 E -99.3 145.1 77.0 0.416 0.0 HOH
 2.661
 O
 O
6b92 1 Q86W50 100.0 0.0 X-RAY
 2018-04-04 MET A:284 A:281 86.0 0.465 E -99.3 148.3 86.0 0.465 0.0 HOH
 2.896
 N
 O
6gfn 1 Q86W50 100.0 0.0 X-RAY
 2018-09-19 MET A:281 A:281 61.0 0.33 E -156.1 122.4 61.0 0.33 0.0 HOH
 8.683
 N
 O
6gt5 1 Q86W50 100.0 0.0 X-RAY
 2018-09-19 MET A:281 A:281 83.0 0.449 E -110.8 145.3 83.0 0.449 0.0 HOH
 8.660
 CG
 O
MET B:281 B:281 75.0 0.405 E -103.0 144.4 NA NA NA
2h00 1 29791720 99.6 0.0 X-RAY
 2006-06-13 MET A:244 A:244 88.0 0.476 E -129.9 129.1 88.0 0.476 0.0 HOH
 7.552
 CG
 O
MET B:244 B:244 69.0 0.373 E -117.4 137.6 NA NA NA
MET C:244 C:244 66.0 0.357 E -110.9 132.6 NA NA NA
6gfk 1 Q86W50 100.0 0.0 X-RAY
 2018-09-19 MET A:241 A:281 83.0 0.449 E -121.1 130.8 83.0 0.449 0.0 SO4
HOH
 6.860
5.210
 O
N
 O1
O
MET B:241 B:281 83.0 0.449 E -120.0 130.3 NA NA NA
MET C:241 C:281 82.0 0.443 E -120.4 128.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86w50-f1 1 Q86W50 100.0 0.0 MET A:281 A:281 65.0 0.351 E -108.1 144.7