Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 34522711 . C A CCDS32626.1:NM_001001437.3:c.256Gtc>Ttc_NP_001001437.2:p.86V>F Homo sapiens C-C motif chemokine ligand 3 like 3 (CCL3L3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2x69 1 P10147 95.71 5e-45 X-RAY
 2010-11-03 VAL A:63 A:63 28.0 0.181 H -65.7 -50.2 NA NA NA
VAL B:63 B:63 25.0 0.161 H -69.7 -44.3 25.0 0.161 0.0
VAL C:63 C:63 23.0 0.148 H -66.5 -56.4 23.0 0.148 0.0
VAL D:63 D:63 29.0 0.187 H -58.5 -59.4 NA NA NA
VAL E:63 E:63 28.0 0.181 H -62.6 -61.7 NA NA NA
3h44 2 P10147 95.71 5e-45 X-RAY
 2010-04-14 VAL C:63 NA:NA DO NA DO DO DO NA NA NA
VAL D:63 NA:NA DO NA DO DO DO NA NA NA
5cor 1 P10147 95.71 5e-45 X-RAY
 2016-04-13 VAL A:63 A:63 24.0 0.155 H -58.9 -48.4 24.0 0.155 0.0 HEZ
HOH
 4.786
5.207
 CG1
N
 C6
O
VAL B:63 B:63 27.0 0.174 H -64.4 -40.7 NA NA NA
VAL C:63 C:63 23.0 0.148 H -66.4 -42.2 12.0 0.077 0.071 A:P10147:0.071
 HEZ
HOH
 5.477
4.296
 N
CB
 O1
O
VAL D:63 D:63 28.0 0.181 H -61.6 -44.5 NA NA NA
VAL E:63 E:63 26.0 0.168 H -63.7 -40.9 13.0 0.084 0.084 C:P10147:0.084
 HEZ
HEZ
HOH
 9.267
3.877
4.441
 N
CG1
CG1
 C6
C1
O
VAL F:63 F:63 23.0 0.148 H -61.3 -44.8 NA NA NA
VAL G:63 G:63 24.0 0.155 H -62.5 -47.5 13.0 0.084 0.071 E:P10147:0.071
 HEZ
HOH
 5.012
4.919
 CG1
N
 C3
O
VAL H:63 H:63 25.0 0.161 H -62.5 -45.7 NA NA NA
VAL I:63 I:63 27.0 0.174 H -61.7 -43.2 15.0 0.097 0.077 G:P10147:0.077
 ACT
 9.430
 N
 O
VAL J:63 J:63 20.0 0.129 H -64.1 -43.2 NA NA NA
5d65 1 P10147 95.71 5e-45 X-RAY
 2016-04-20 VAL A:63 A:63 29.0 0.187 H -63.7 -40.9 17.0 0.11 0.077 B:P10147:0.077
 BGC
BGC
 7.855
6.814
 O
C
 O2
O6
VAL B:63 B:63 29.0 0.187 H -62.4 -44.0 17.0 0.11 0.077 E:P10147:0.077
 IDS
SGN
IDS
SGN
BGC
 7.989
8.780
9.709
9.357
4.457
 N
O
N
N
CG1
 O6A
O2S
O2S
O3
O3
VAL C:63 C:63 23.0 0.148 H -61.5 -41.5 23.0 0.148 0.0 BGC
 6.151
 N
 O6
VAL D:63 D:63 31.0 0.2 H -67.1 -43.8 17.0 0.11 0.09 C:P10147:0.09
VAL E:63 E:63 29.0 0.187 H -67.8 -42.6 29.0 0.187 0.0
4zkb 2 P10147 97.06 1e-44 X-RAY
 2015-07-08 VAL B:62 B:62 75.0 NA I -83.6 -61.8 75.0 NA NA
3kbx 1 P10147 92.86 3e-44 X-RAY
 2010-10-27 MSE A:63 A:63 24.0 0.13 H -68.7 -44.1 24.0 0.13 0.0
MSE B:63 B:63 22.0 0.119 H -65.1 -44.1 NA NA NA
MSE C:63 C:63 18.0 0.097 H -72.4 -43.7 NA NA NA
MSE D:63 D:63 14.0 0.076 H -69.0 -54.2 NA NA NA
MSE E:63 E:63 22.0 0.119 H -67.7 -56.2 NA NA NA
3fpu 2 P10147 95.59 5e-44 X-RAY
 2010-01-12 VAL B:63 B:63 25.0 0.161 H -57.0 -53.1 25.0 0.161 0.0 HOH
 4.631
 N
 O
2x6g 1 P10147 94.29 8e-44 X-RAY
 2010-11-03 VAL A:63 A:63 20.0 0.129 H -60.8 -53.2 NA NA NA
VAL B:63 B:63 25.0 0.161 H -54.8 -44.8 NA NA NA
VAL C:63 C:63 23.0 0.148 H -59.6 -54.3 NA NA NA
VAL D:63 D:63 28.0 0.181 H -65.1 -46.2 NA NA NA
VAL E:63 E:63 22.0 0.142 H -68.9 -46.3 NA NA NA
VAL F:63 F:63 17.0 0.11 H -66.4 -45.8 NA NA NA
VAL G:63 G:63 29.0 0.187 H -59.9 -47.3 NA NA NA
VAL H:63 H:63 47.0 0.303 H -57.5 -50.2 NA NA NA
VAL I:63 I:63 23.0 0.148 H -60.1 -46.6 NA NA NA
VAL J:63 J:63 32.0 0.206 H -58.9 -48.2 NA NA NA
VAL K:63 K:63 29.0 0.187 H -56.0 -54.2 NA NA NA
VAL L:63 L:63 30.0 0.194 H -60.9 -41.1 NA NA NA
VAL M:63 M:63 25.0 0.161 H -65.9 -42.2 NA NA NA
VAL N:63 N:63 25.0 0.161 H -68.3 -46.4 NA NA NA
VAL O:63 O:63 42.0 0.271 H -68.6 -36.8 NA NA NA
VAL P:63 P:63 45.0 0.29 H -61.9 -44.8 NA NA NA
VAL Q:63 Q:63 30.0 0.194 H -56.5 -39.9 30.0 0.194 0.0 HOH
 2.719
 CG1
 O
VAL R:63 R:63 12.0 0.077 H -64.1 -45.4 12.0 0.077 0.0 HOH
 5.044
 CG2
 O
1b50 1 P10147 95.59 2e-43 NMR
 1999-07-22 VAL A:62 A:62 9.0 0.058 T -59.9 -13.3 9.0 0.058 0.0
VAL B:62 B:62 8.0 0.052 T -59.9 -13.3 8.0 0.052 0.0
1b53 1 P10147 95.59 2e-43 NMR
 1999-07-22 VAL A:62 A:62 15.0 0.097 H -103.4 -33.8 15.0 0.097 0.0
VAL B:62 B:62 15.0 0.097 H -103.4 -33.9 15.0 0.097 0.0
4ra8 1 P10147 94.2 2e-43 X-RAY
 2014-09-24 VAL A:63 A:63 28.0 0.181 H -65.7 -46.0 28.0 0.181 0.0 HOH
 4.045
 CB
 O
VAL B:63 B:63 30.0 0.194 H -65.8 -47.1 NA NA NA
VAL C:63 C:63 29.0 0.187 H -65.0 -47.0 NA NA NA
VAL D:63 D:63 29.0 0.187 H -61.5 -43.3 NA NA NA
VAL E:63 E:63 24.0 0.155 H -64.6 -47.5 NA NA NA
7f1q 1 P10147,P51681 95.59 2e-40 EM
 2021-07-14 VAL A:62 R:62 23.0 0.148 H -67.0 -21.6 23.0 0.148 0.0
7f1t 1 P10147,P51681,P00268 95.59 7e-40 X-RAY
 2021-07-14 VAL A:62 A:-34 24.0 0.155 H -65.6 -49.3 24.0 0.155 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16619-f1 1 P16619 100.0 6e-65 VAL A:86 A:86 17.0 0.11 H -58.5 -50.3
af-p10147-f1 1 P10147 94.62 3e-59 VAL A:85 A:85 16.0 0.103 H -58.8 -50.9