Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 34523293 . G A CCDS32626.1:NM_001001437.3:c.95aCc>aTc_NP_001001437.2:p.32T>I Homo sapiens C-C motif chemokine ligand 3 like 3 (CCL3L3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2x69 1 P10147 95.71 5e-45 X-RAY
 2010-11-03 THR A:9 A:9 86.0 0.614 -109.1 145.1 NA NA NA
THR B:9 B:9 87.0 0.621 -100.3 141.8 36.0 0.257 0.364 C:P10147:0.364
 HOH
 7.546
 OG1
 O
THR C:9 C:9 80.0 0.571 -107.3 136.5 34.0 0.243 0.328 B:P10147:0.329
 HOH
 2.958
 CG2
 O
THR D:9 D:9 82.0 0.586 -101.4 135.5 NA NA NA
THR E:9 E:9 86.0 0.614 -105.8 132.2 NA NA NA
3h44 2 P10147 95.71 5e-45 X-RAY
 2010-04-14 THR C:9 NA:NA DO NA DO DO DO NA NA NA
THR D:9 NA:NA DO NA DO DO DO NA NA NA
5cor 1 P10147 95.71 5e-45 X-RAY
 2016-04-13 THR A:9 A:9 79.0 0.564 -120.1 145.2 79.0 0.564 0.0 HEZ
HOH
 9.293
3.435
 CG2
CG2
 O1
O
THR B:9 B:9 78.0 0.557 -109.3 138.9 NA NA NA
THR C:9 C:9 76.0 0.543 -107.7 141.5 76.0 0.543 0.0 HOH
 4.086
 CB
 O
THR D:9 D:9 80.0 0.571 -117.0 131.2 NA NA NA
THR E:9 E:9 80.0 0.571 -116.1 133.3 80.0 0.571 0.0 HOH
 3.337
 CG2
 O
THR F:9 F:9 76.0 0.543 -118.1 142.1 NA NA NA
THR G:9 G:9 76.0 0.543 -120.6 143.5 76.0 0.543 0.0 ACT
HOH
 7.328
3.254
 O
CG2
 CH3
O
THR H:9 H:9 84.0 0.6 -108.9 141.9 NA NA NA
THR I:9 I:9 83.0 0.593 -119.3 136.2 83.0 0.593 0.0 HOH
 3.203
 CG2
 O
THR J:9 J:9 81.0 0.579 -136.6 149.6 NA NA NA
5d65 1 P10147 95.71 5e-45 X-RAY
 2016-04-20 THR A:9 A:9 91.0 0.65 -72.8 140.3 62.0 0.443 0.207 C:P10147:0.207
THR B:9 B:9 80.0 0.571 -120.0 132.9 27.0 0.193 0.378 C:P10147:0.321
D:P10147:0.043
A:P10147:0.014
 CL
BGC
 7.648
3.209
 O
OG1
 CL
O5
THR C:9 C:9 82.0 0.586 -111.9 137.0 13.0 0.093 0.493 A:P10147:0.164
B:P10147:0.35
 CL
 7.841
 O
 CL
THR D:9 D:9 78.0 0.557 -104.0 131.8 24.0 0.171 0.386 E:P10147:0.307
B:P10147:0.079
 BGC
CL
 3.597
7.675
 OG1
O
 O3
CL
THR E:9 E:9 76.0 0.543 -98.9 131.4 29.0 0.207 0.336 D:P10147:0.336
 CL
 7.799
 O
 CL
4zkb 2 P10147 97.06 1e-44 X-RAY
 2015-07-08 THR B:8 B:8 196.0 1.0 360.0 101.2 110.0 0.786 0.214 A:Q2F862:0.614
 NAG
NAG
 8.030
7.051
 N
N
 O4
N2
3kbx 1 P10147 92.86 3e-44 X-RAY
 2010-10-27 THR A:9 A:9 83.0 0.593 -123.5 139.6 35.0 0.25 0.343 A:P10147:0.343
 HOH
 4.309
 OG1
 O
THR B:9 B:9 84.0 0.6 -108.3 131.5 NA NA NA
THR C:9 C:9 86.0 0.614 -106.1 137.2 NA NA NA
THR D:9 D:9 83.0 0.593 -99.1 134.1 NA NA NA
THR E:9 E:9 80.0 0.571 -107.1 125.2 NA NA NA
3fpu 2 P10147 95.59 5e-44 X-RAY
 2010-01-12 THR B:9 B:9 146.0 1.0 -62.9 155.2 4.0 0.029 0.971 A:P0C8E7:1.0
 HOH
 2.904
 OG1
 O
2x6g 1 P10147 94.29 8e-44 X-RAY
 2010-11-03 THR A:9 A:9 77.0 0.55 -118.7 140.3 NA NA NA
THR B:9 B:9 79.0 0.564 -119.1 142.3 NA NA NA
THR C:9 C:9 85.0 0.607 -120.5 137.4 NA NA NA
THR D:9 D:9 79.0 0.564 -106.4 131.2 NA NA NA
THR E:9 E:9 78.0 0.557 -102.8 132.8 NA NA NA
THR F:9 F:9 82.0 0.586 -114.0 135.9 NA NA NA
THR G:9 G:9 80.0 0.571 -112.1 132.2 NA NA NA
THR H:9 H:9 81.0 0.579 -98.8 144.0 NA NA NA
THR I:9 I:9 75.0 0.536 -120.0 133.7 NA NA NA
THR J:9 J:9 70.0 0.5 -117.1 138.3 NA NA NA
THR K:9 K:9 92.0 0.657 -121.9 140.6 NA NA NA
THR L:9 L:9 88.0 0.629 -62.9 128.6 NA NA NA
THR M:9 M:9 91.0 0.65 -100.2 149.1 NA NA NA
THR N:9 N:9 87.0 0.621 -113.6 146.1 NA NA NA
THR O:9 O:9 74.0 0.529 -116.7 141.2 NA NA NA
THR P:9 P:9 79.0 0.564 -119.7 149.0 NA NA NA
THR Q:9 Q:9 81.0 0.579 -104.4 136.6 33.0 0.236 0.343 R:P10147:0.343
 HOH
 2.871
 CG2
 O
THR R:9 R:9 78.0 0.557 -133.9 119.8 31.0 0.221 0.336 Q:P10147:0.336
 HOH
 3.057
 CG2
 O
1b50 1 P10147 95.59 2e-43 NMR
 1999-07-22 THR A:8 A:8 70.0 0.5 -87.1 95.3 15.0 0.107 0.393 B:P10147:0.393
THR B:8 B:8 72.0 0.514 -87.1 95.3 15.0 0.107 0.407 A:P10147:0.407
1b53 1 P10147 95.59 2e-43 NMR
 1999-07-22 THR A:8 A:8 53.0 0.379 -53.2 90.8 14.0 0.1 0.279 B:P10147:0.279
THR B:8 B:8 53.0 0.379 -53.2 90.8 15.0 0.107 0.272 A:P10147:0.271
4ra8 1 P10147 94.2 2e-43 X-RAY
 2014-09-24 THR A:9 A:9 85.0 0.607 -92.6 134.0 36.0 0.257 0.35 A:P10147:0.35
 HOH
 3.063
 OG1
 O
THR B:9 B:9 79.0 0.564 -103.2 127.5 NA NA NA
THR C:9 C:9 85.0 0.607 -69.1 131.8 NA NA NA
THR D:9 D:9 83.0 0.593 -92.6 128.1 NA NA NA
THR E:9 E:9 82.0 0.586 -97.5 139.7 NA NA NA
7f1q 1 P10147,P51681 95.59 2e-40 EM
 2021-07-14 THR A:8 R:8 18.0 0.129 S -69.8 -30.4 18.0 0.129 0.0
7f1t 1 P10147,P51681,P00268 95.59 7e-40 X-RAY
 2021-07-14 THR A:8 A:-88 38.0 0.271 S -82.4 -30.5 38.0 0.271 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16619-f1 1 P16619 100.0 6e-65 THR A:32 A:32 62.0 0.443 -87.7 131.9
af-p10147-f1 1 P10147 94.62 3e-59 THR A:31 A:31 65.0 0.464 -97.7 136.3