Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 34523296 . G A CCDS32626.1:NM_001001437.3:c.92cCg>cTg_NP_001001437.2:p.31P>L Homo sapiens C-C motif chemokine ligand 3 like 3 (CCL3L3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2x69 1 P10147 95.71 5e-45 X-RAY
 2010-11-03 PRO A:8 A:8 125.0 0.862 -56.7 152.6 NA NA NA
PRO B:8 B:8 124.0 0.855 -61.3 146.8 20.0 0.138 0.717 C:P10147:0.717
PRO C:8 C:8 116.0 0.8 -64.3 152.8 17.0 0.117 0.683 B:P10147:0.683
 HOH
 4.187
 CA
 O
PRO D:8 D:8 117.0 0.807 -68.4 151.0 NA NA NA
PRO E:8 E:8 118.0 0.814 -61.4 149.0 NA NA NA
3h44 2 P10147 95.71 5e-45 X-RAY
 2010-04-14 PRO C:8 NA:NA DO NA DO DO DO NA NA NA
PRO D:8 NA:NA DO NA DO DO DO NA NA NA
5cor 1 P10147 95.71 5e-45 X-RAY
 2016-04-13 PRO A:8 A:8 131.0 0.903 -61.0 147.9 131.0 0.903 0.0 HOH
 4.021
 CA
 O
PRO B:8 B:8 120.0 0.828 -58.1 157.5 NA NA NA
PRO C:8 C:8 126.0 0.869 -67.0 153.2 114.0 0.786 0.083 E:P10147:0.083
 HOH
 6.706
 O
 O
PRO D:8 D:8 127.0 0.876 -63.2 158.3 NA NA NA
PRO E:8 E:8 122.0 0.841 -55.7 151.7 122.0 0.841 0.0 HOH
 4.306
 CA
 O
PRO F:8 F:8 135.0 0.931 -56.0 149.4 NA NA NA
PRO G:8 G:8 124.0 0.855 -62.2 148.8 101.0 0.697 0.158 I:P10147:0.159
 ACT
HOH
 8.312
4.058
 CB
CA
 CH3
O
PRO H:8 H:8 124.0 0.855 -63.3 153.5 NA NA NA
PRO I:8 I:8 129.0 0.89 -59.9 158.9 129.0 0.89 0.0 HOH
 4.062
 CA
 O
PRO J:8 J:8 131.0 0.903 -66.7 153.8 NA NA NA
5d65 1 P10147 95.71 5e-45 X-RAY
 2016-04-20 PRO A:8 A:8 115.0 0.793 -96.6 119.8 90.0 0.621 0.172 C:P10147:0.172
PRO B:8 B:8 121.0 0.834 -58.0 161.6 12.0 0.083 0.751 C:P10147:0.71
D:P10147:0.021
A:P10147:0.097
 BGC
 5.265
 O
 C6
PRO C:8 C:8 119.0 0.821 -68.1 165.5 0.0 0.0 0.821 A:P10147:0.241
D:P10147:0.152
B:P10147:0.683
PRO D:8 D:8 123.0 0.848 -55.1 150.7 19.0 0.131 0.717 E:P10147:0.717
 BGC
 5.333
 C
 O3
PRO E:8 E:8 127.0 0.876 -60.7 147.0 21.0 0.145 0.731 D:P10147:0.724
B:P10147:0.09
4zkb 2 P10147 97.06 1e-44 X-RAY
 2015-07-08 PRO B:7 NA:NA DO NA DO DO DO NA NA NA
3kbx 1 P10147 92.86 3e-44 X-RAY
 2010-10-27 PRO A:8 A:8 129.0 0.89 -61.4 156.8 25.0 0.172 0.718 A:P10147:0.717
 HOH
 4.875
 CB
 O
PRO B:8 B:8 124.0 0.855 -62.7 146.7 NA NA NA
PRO C:8 C:8 129.0 0.89 -46.4 137.8 NA NA NA
PRO D:8 D:8 123.0 0.848 -57.8 129.9 NA NA NA
PRO E:8 E:8 127.0 0.876 -58.7 147.5 NA NA NA
3fpu 2 P10147 95.59 5e-44 X-RAY
 2010-01-12 PRO B:8 B:8 108.0 0.745 -69.0 150.6 1.0 0.007 0.738 A:P0C8E7:0.738
 HOH
 2.659
 O
 O
2x6g 1 P10147 94.29 8e-44 X-RAY
 2010-11-03 PRO A:8 A:8 129.0 0.89 -62.4 159.4 NA NA NA
PRO B:8 B:8 129.0 0.89 -74.1 160.4 NA NA NA
PRO C:8 C:8 126.0 0.869 -57.6 157.7 NA NA NA
PRO D:8 D:8 129.0 0.89 -68.5 148.8 NA NA NA
PRO E:8 E:8 130.0 0.897 -56.3 142.8 NA NA NA
PRO F:8 F:8 122.0 0.841 -62.3 149.7 NA NA NA
PRO G:8 G:8 123.0 0.848 -57.1 148.2 NA NA NA
PRO H:8 H:8 127.0 0.876 -67.3 147.4 NA NA NA
PRO I:8 I:8 128.0 0.883 -67.6 159.3 NA NA NA
PRO J:8 J:8 128.0 0.883 -65.3 155.7 NA NA NA
PRO K:8 K:8 122.0 0.841 -49.7 144.9 NA NA NA
PRO L:8 L:8 183.0 1.0 360.0 62.2 NA NA NA
PRO M:8 M:8 120.0 0.828 -75.5 140.1 NA NA NA
PRO N:8 N:8 123.0 0.848 -61.1 154.9 NA NA NA
PRO O:8 O:8 119.0 0.821 -62.5 155.6 NA NA NA
PRO P:8 P:8 128.0 0.883 -66.5 151.4 NA NA NA
PRO Q:8 Q:8 125.0 0.862 -66.7 145.1 18.0 0.124 0.738 R:P10147:0.738
 HOH
 4.300
 C
 O
PRO R:8 R:8 125.0 0.862 -62.1 166.5 23.0 0.159 0.703 Q:P10147:0.703
 HOH
 3.289
 O
 O
1b50 1 P10147 95.59 2e-43 NMR
 1999-07-22 PRO A:7 A:7 117.0 0.807 -78.6 -176.1 43.0 0.297 0.51 B:P10147:0.51
PRO B:7 B:7 115.0 0.793 -78.5 -176.1 41.0 0.283 0.51 A:P10147:0.51
1b53 1 P10147 95.59 2e-43 NMR
 1999-07-22 PRO A:7 A:7 114.0 0.786 -81.5 117.7 50.0 0.345 0.441 B:P10147:0.441
PRO B:7 B:7 115.0 0.793 -81.5 117.7 41.0 0.283 0.51 A:P10147:0.51
4ra8 1 P10147 94.2 2e-43 X-RAY
 2014-09-24 ALA A:8 A:8 94.0 0.817 -46.8 147.2 14.0 0.122 0.695 A:P10147:0.696
 HOH
 4.231
 CA
 O
ALA B:8 B:8 88.0 0.765 -71.8 148.6 NA NA NA
ALA C:8 C:8 92.0 0.8 -53.8 142.4 NA NA NA
ALA D:8 D:8 91.0 0.791 -59.8 158.4 NA NA NA
ALA E:8 E:8 97.0 0.843 -76.1 133.2 NA NA NA
7f1q 1 P10147,P51681 95.59 2e-40 EM
 2021-07-14 PRO A:7 R:7 1.0 0.007 -71.4 161.7 1.0 0.007 0.0
7f1t 1 P10147,P51681,P00268 95.59 7e-40 X-RAY
 2021-07-14 PRO A:7 A:-89 2.0 0.014 -78.7 153.1 2.0 0.014 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16619-f1 1 P16619 100.0 6e-65 PRO A:31 A:31 130.0 0.897 -61.1 129.7
af-p10147-f1 1 P10147 94.62 3e-59 PRO A:30 A:30 131.0 0.903 -61.4 133.9