Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 36895914 . C A CCDS32638.1:NM_007144.2:c.134cGc>cTc_NP_009075.1:p.45R>L Homo sapiens polycomb group ring finger 2 (PCGF2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3rpg 2 P35226 88.99 8e-70 X-RAY
 2011-08-17 ARG B:45 B:45 182.0 0.809 H -66.7 -46.5 124.0 0.551 0.258 C:Q99496:0.258
 ZN
HOH
 9.621
4.940
 CB
NE
 ZN
O
4r8p 7 P35226 88.89 5e-69 X-RAY
 2014-11-05 ARG K:46 K:45 182.0 0.809 H -65.9 -35.8 135.0 0.6 0.209 L:Q99496+P61077:0.209
 ZN
 9.351
 CD
 ZN
ARG M:46 M:45 199.0 0.884 H -81.7 -14.6 135.0 0.6 0.284 N:Q99496+P61077:0.284
 ZN
 9.184
 CD
 ZN
2ckl 1 P25916 88.89 5e-69 X-RAY
 2006-05-11 ARG A:45 A:45 185.0 0.822 H -60.1 -45.7 117.0 0.52 0.302 B:Q9CQJ4:0.302
 ZN
HOH
 9.459
2.734
 CB
O
 ZN
O
6wi7 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 ARG A:152 A:1045 63.0 NA H -66.8 -42.1 63.0 NA NA ZN
HOH
 9.395
2.768
 CB
O
 ZN
O
6wi8 1 X6RFN3,P35226 93.14 3e-67 X-RAY
 2021-04-14 ARG A:152 A:1045 179.0 0.796 H -58.7 -38.5 179.0 0.796 0.0 ZN
HOH
 9.108
9.249
 CB
N
 ZN
O
ARG B:152 B:1045 118.0 0.524 H -66.2 -34.9 NA NA NA
7nd1 2 P35226 92.93 2e-65 NMR
 2021-06-16 ARG B:42 H:1045 180.0 0.8 H -64.4 -39.3 119.0 0.529 0.271 A:Q99496:0.271
 ZN
 8.499
 HD2
 ZN
2h0d 1 Q5T8Z3 92.78 7e-65 X-RAY
 2006-05-23 ARG A:41 A:45 185.0 0.822 H -70.1 -38.5 125.0 0.556 0.266 B:Q99496:0.267
 ZN
HOH
 9.550
3.235
 CG
NH1
 ZN
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p35227-f1 1 P35227 100.0 0.0 ARG A:45 A:45 175.0 0.778 H -59.7 -43.5