Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 37825998 | . | C | A | CCDS11343.1:NM_002686.4:c.319Cgc>Agc_NP_002677.1:p.107R>S | Homo sapiens phenylethanolamine N-methyltransferase (PNMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1hnn | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2001-12-07 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -49.7 | -34.1 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.150 3.168 |
N NH2 |
O3' O |
||
ARG | B:107 | B:607 | 57.0 | 0.253 | H | -59.0 | -25.1 | NA | NA | NA | |||||||||||||
1n7i | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2003-12-23 | ARG | A:107 | A:107 | 39.0 | 0.173 | H | -46.8 | -40.3 | 39.0 | 0.173 | 0.0 |
SAH HOH |
7.608 8.369 |
N O |
O3' O |
||
ARG | B:107 | B:607 | 56.0 | 0.249 | H | -51.8 | -40.7 | NA | NA | NA | |||||||||||||
1n7j | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2003-12-23 | ARG | A:107 | A:107 | 43.0 | 0.191 | H | -52.8 | -35.2 | 43.0 | 0.191 | 0.0 |
SAH HOH |
7.545 3.741 |
N NH1 |
O3' O |
||
ARG | B:107 | B:607 | 60.0 | 0.267 | H | -59.4 | -32.4 | NA | NA | NA | |||||||||||||
6ws1 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2020-08-05 | ARG | A:119 | A:107 | 48.0 | 0.213 | H | -56.3 | -32.5 | 48.0 | 0.213 | 0.0 |
SAH |
7.715 |
NH1 |
O2' |
||
ARG | B:119 | B:107 | 56.0 | 0.249 | H | -55.2 | -34.7 | 56.0 | 0.249 | 0.0 |
U87 EDO HOH |
7.675 6.155 5.747 |
N NH1 NH1 |
O3' C2 O |
|||||||||
1yz3 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2006-02-07 | ARG | A:107 | A:107 | 54.0 | 0.24 | H | -59.9 | -30.1 | 54.0 | 0.24 | 0.0 |
SAH HOH |
7.584 2.902 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -67.2 | -29.3 | 52.0 | 0.231 | 0.0 |
SAH HOH |
7.509 2.829 |
NH1 O |
O2' O |
|||||||||
2an3 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2006-03-14 | ARG | A:107 | A:107 | 44.0 | 0.196 | H | -54.8 | -31.8 | 44.0 | 0.196 | 0.0 |
SAH HOH |
7.376 3.101 |
N NH2 |
O3' O |
||
ARG | B:107 | B:607 | 51.0 | 0.227 | H | -63.1 | -33.8 | NA | NA | NA | |||||||||||||
2an4 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2006-03-14 | ARG | A:107 | A:107 | 40.0 | 0.178 | H | -55.4 | -34.8 | 40.0 | 0.178 | 0.0 |
SAH HOH |
7.321 3.388 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -58.8 | -40.7 | NA | NA | NA | |||||||||||||
2an5 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2006-03-14 | ARG | A:107 | A:107 | 42.0 | 0.187 | H | -55.1 | -36.6 | 42.0 | 0.187 | 0.0 |
SAH HOH |
7.357 3.417 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 50.0 | 0.222 | H | -56.4 | -42.9 | NA | NA | NA | |||||||||||||
2g70 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2007-02-13 | ARG | A:107 | A:107 | 38.0 | 0.169 | H | -67.1 | -21.0 | 38.0 | 0.169 | 0.0 |
SAM HOH |
7.565 8.246 |
N O |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -59.9 | -24.3 | NA | NA | NA | |||||||||||||
2g71 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2007-02-13 | ARG | A:107 | A:107 | 50.0 | 0.222 | H | -63.0 | -34.5 | 50.0 | 0.222 | 0.0 |
SAH HOH |
7.479 2.725 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -60.2 | -31.6 | NA | NA | NA | |||||||||||||
2g72 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2007-02-13 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -60.5 | -31.9 | 46.0 | 0.204 | 0.0 |
SAM HOH |
7.466 2.729 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -59.7 | -31.1 | NA | NA | NA | |||||||||||||
2g8n | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2006-09-12 | ARG | A:107 | A:107 | 56.0 | 0.249 | H | -60.7 | -32.9 | 56.0 | 0.249 | 0.0 |
SAH HOH |
7.554 3.049 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -61.5 | -31.7 | NA | NA | NA | |||||||||||||
2ony | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2007-10-09 | ARG | A:107 | A:107 | 44.0 | 0.196 | H | -66.6 | -32.9 | 44.0 | 0.196 | 0.0 |
SAH HOH |
7.572 3.600 |
N NH2 |
O3' O |
||
ARG | B:107 | B:607 | 54.0 | 0.24 | H | -61.6 | -27.8 | NA | NA | NA | |||||||||||||
3hcb | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -71.6 | -32.3 | 46.0 | 0.204 | 0.0 |
SAH |
7.755 |
N |
O3' |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -63.0 | -40.3 | NA | NA | NA | |||||||||||||
3hcc | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 39.0 | 0.173 | H | -63.1 | -32.8 | 39.0 | 0.173 | 0.0 |
SAH HOH |
7.644 3.026 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -59.8 | -36.0 | NA | NA | NA | |||||||||||||
3hcd | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 43.0 | 0.191 | H | -55.0 | -39.9 | 43.0 | 0.191 | 0.0 |
SAH HOH |
7.254 3.228 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -58.5 | -40.5 | NA | NA | NA | |||||||||||||
3hcf | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 40.0 | 0.178 | H | -50.7 | -31.4 | 40.0 | 0.178 | 0.0 |
SAH HOH |
7.484 3.551 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 49.0 | 0.218 | H | -51.8 | -44.6 | NA | NA | NA | |||||||||||||
3kpj | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 40.0 | 0.178 | H | -62.1 | -37.9 | 40.0 | 0.178 | 0.0 |
SAH HOH |
7.620 3.098 |
NH1 NH2 |
O2' O |
||
ARG | B:107 | B:107 | 51.0 | 0.227 | H | -63.0 | -40.9 | 51.0 | 0.227 | 0.0 |
SAH HOH |
7.702 3.056 |
N NE |
O2' O |
|||||||||
3kpu | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -58.5 | -34.8 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.751 2.613 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 57.0 | 0.253 | H | -60.8 | -37.5 | 57.0 | 0.253 | 0.0 |
SAH HOH |
7.603 2.818 |
N O |
O3' O |
|||||||||
3kpv | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 48.0 | 0.213 | H | -62.2 | -38.8 | 48.0 | 0.213 | 0.0 |
SAH HOH |
7.559 3.222 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -57.9 | -38.4 | 53.0 | 0.236 | 0.0 |
SAH HOH |
7.675 2.881 |
N O |
O3' O |
|||||||||
3kpw | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 43.0 | 0.191 | H | -62.7 | -36.1 | 43.0 | 0.191 | 0.0 |
SAH HOH |
7.740 3.807 |
N NH1 |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -59.3 | -37.8 | 53.0 | 0.236 | 0.0 |
SAH HOH |
7.575 3.034 |
N NE |
O3' O |
|||||||||
3kpy | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -65.0 | -34.3 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.654 4.432 |
N NH1 |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -58.8 | -33.3 | 56.0 | 0.249 | 0.0 |
SAH HOH |
7.566 2.860 |
N O |
O3' O |
|||||||||
3kqm | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -65.0 | -37.8 | 46.0 | 0.204 | 0.0 |
SAH HOH |
7.722 4.217 |
N NH1 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -61.9 | -36.6 | 52.0 | 0.231 | 0.0 |
SAH HOH |
7.716 3.210 |
N O |
O3' O |
|||||||||
3kqo | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -67.2 | -31.0 | 46.0 | 0.204 | 0.0 |
SAH HOH |
7.725 2.909 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 57.0 | 0.253 | H | -59.2 | -37.5 | 57.0 | 0.253 | 0.0 |
SAH HOH |
7.709 2.838 |
N O |
O3' O |
|||||||||
3kqp | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 39.0 | 0.173 | H | -60.7 | -33.8 | 39.0 | 0.173 | 0.0 |
SAH HOH |
7.579 4.267 |
N NH1 |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -63.2 | -34.3 | 53.0 | 0.236 | 0.0 |
SAH HOH |
7.590 4.977 |
N NH2 |
O3' O |
|||||||||
3kqq | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -59.8 | -39.0 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.643 4.460 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -54.7 | -43.2 | 56.0 | 0.249 | 0.0 |
SAH HOH |
7.623 2.900 |
N NE |
O3' O |
|||||||||
3kqs | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 48.0 | 0.213 | H | -60.8 | -34.0 | 48.0 | 0.213 | 0.0 |
SAH HOH |
7.675 2.845 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 58.0 | 0.258 | H | -59.9 | -34.8 | 58.0 | 0.258 | 0.0 |
SAH HOH |
7.694 2.900 |
N O |
O3' O |
|||||||||
3kqt | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 49.0 | 0.218 | H | -62.2 | -33.9 | 49.0 | 0.218 | 0.0 |
SAH HOH |
7.686 4.997 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -60.8 | -32.1 | 53.0 | 0.236 | 0.0 |
SAH HOH |
7.705 2.935 |
N NE |
O3' O |
|||||||||
3kqv | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -62.1 | -33.3 | 46.0 | 0.204 | 0.0 |
SAH HOH |
7.690 2.855 |
N O |
O3' O |
||
ARG | B:107 | B:107 | 55.0 | 0.244 | H | -58.4 | -37.6 | 55.0 | 0.244 | 0.0 |
SAH HOH |
7.663 2.935 |
N NH2 |
O3' O |
|||||||||
3kqw | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -62.0 | -33.2 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.609 3.589 |
N NH1 |
O3' O |
||
ARG | B:107 | B:107 | 54.0 | 0.24 | H | -62.0 | -30.6 | 54.0 | 0.24 | 0.0 |
SAH HOH |
7.591 2.938 |
N NH2 |
O3' O |
|||||||||
3kqy | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -65.2 | -31.8 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.701 3.007 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -59.9 | -34.9 | 56.0 | 0.249 | 0.0 |
SAH HOH |
7.582 2.907 |
N NH2 |
O3' O |
|||||||||
3kr0 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 44.0 | 0.196 | H | -56.8 | -36.9 | 44.0 | 0.196 | 0.0 |
SAH HOH |
7.643 6.514 |
N N |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -55.8 | -39.2 | 53.0 | 0.236 | 0.0 |
SAH HOH |
7.584 2.806 |
N NE |
O3' O |
|||||||||
3kr1 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -64.3 | -31.0 | 45.0 | 0.2 | 0.0 |
SAH HOH |
7.621 3.261 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 55.0 | 0.244 | H | -59.9 | -36.1 | 55.0 | 0.244 | 0.0 |
SAH HOH |
7.606 2.781 |
N NH2 |
O3' O |
|||||||||
3kr2 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2010-09-29 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -63.9 | -34.1 | 46.0 | 0.204 | 0.0 |
SAH HOH |
7.764 4.588 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -60.4 | -33.5 | 52.0 | 0.231 | 0.0 |
SAH HOH |
7.610 2.889 |
N O |
O3' O |
|||||||||
4dm3 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2012-04-25 | ARG | A:107 | A:107 | 48.0 | 0.213 | H | -63.7 | -32.5 | 48.0 | 0.213 | 0.0 |
SAH HOH |
7.723 2.747 |
N NE |
O3' O |
||
ARG | B:107 | B:107 | 56.0 | 0.249 | H | -60.6 | -33.0 | 56.0 | 0.249 | 0.0 |
SAH HOH |
7.575 2.606 |
N NH2 |
O3' O |
|||||||||
4mik | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2014-09-10 | ARG | A:107 | A:107 | 46.0 | 0.204 | H | -58.8 | -32.8 | 46.0 | 0.204 | 0.0 |
JIL TRS HOH |
7.112 9.555 1.948 |
H HG2 HE |
H011 H12 O |
||
ARG | B:107 | B:107 | 55.0 | 0.244 | H | -55.8 | -35.4 | 55.0 | 0.244 | 0.0 |
JIL TRS HOH |
6.859 9.376 2.014 |
H N HH22 |
H011 H22 O |
|||||||||
4mq4 | 1 | P11086 | 100.0 | 0.0 |
X-RAY |
2014-10-15 | ARG | A:107 | A:107 | 45.0 | 0.2 | H | -60.3 | -33.9 | 45.0 | 0.2 | 0.0 |
2D5 TRS HOH |
6.536 9.396 2.131 |
HG3 HG2 HH22 |
H171 H22 O |
||
ARG | B:107 | B:107 | 42.0 | 0.187 | H | -60.6 | -34.1 | 42.0 | 0.187 | 0.0 |
2D5 TRS HOH |
7.139 9.550 2.944 |
H HA O |
H151 H31 O |
|||||||||
3hca | 1 | P11086 | 99.65 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 48.0 | 0.213 | H | -60.3 | -37.6 | 48.0 | 0.213 | 0.0 |
SAH HOH |
7.393 2.903 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 55.0 | 0.244 | H | -58.3 | -34.2 | NA | NA | NA | |||||||||||||
3hce | 1 | P11086 | 99.65 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:107 | A:107 | 44.0 | 0.196 | H | -56.6 | -30.0 | 44.0 | 0.196 | 0.0 |
SAH HOH |
7.597 3.032 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 52.0 | 0.231 | H | -53.4 | -31.7 | NA | NA | NA | |||||||||||||
2obf | 1 | P11086 | 99.65 | 0.0 |
X-RAY |
2007-10-09 | ARG | A:107 | A:107 | 49.0 | 0.218 | H | -58.7 | -33.5 | 49.0 | 0.218 | 0.0 |
SAH HOH |
7.572 2.772 |
N NE |
O3' O |
||
ARG | B:107 | B:607 | 57.0 | 0.253 | H | -55.2 | -35.2 | NA | NA | NA | |||||||||||||
2onz | 1 | P11086 | 99.65 | 0.0 |
X-RAY |
2007-10-09 | ARG | A:107 | A:107 | 48.0 | 0.213 | H | -55.5 | -31.8 | 48.0 | 0.213 | 0.0 |
SAH HOH |
7.486 2.935 |
N NE |
O3' O |
||
ARG | B:107 | B:607 | 50.0 | 0.222 | H | -57.3 | -33.5 | NA | NA | NA | |||||||||||||
2opb | 1 | P11086 | 99.65 | 0.0 |
X-RAY |
2007-10-09 | ARG | A:107 | A:107 | 55.0 | 0.244 | H | -54.8 | -31.1 | 55.0 | 0.244 | 0.0 |
SAH HOH |
7.444 2.978 |
N NH2 |
O3' O |
||
ARG | B:107 | B:107 | 53.0 | 0.236 | H | -60.0 | -27.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11086-f1 | 1 | P11086 | 100.0 | 0.0 | ARG | A:107 | A:107 | 52.0 | 0.231 | H | -58.7 | -37.3 |