Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4835957 . T A CCDS54068.1:NM_000173.5:c.58Tgt>Agt_NP_000164.5:p.20C>S Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 CYS A:4 G:4 9.0 0.067 S -144.0 -171.0 9.0 0.067 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS D:4 G:4 0.0 0.0 S -102.7 172.6 0.0 0.0 0.0 HOH
 7.495
 O
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS A:4 G:4 6.0 0.044 S -112.5 162.7 6.0 0.044 0.0 HOH
 6.893
 C
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 CYS A:4 A:4 8.0 0.059 S -114.6 166.8 8.0 0.059 0.0 HOH
 9.031
 SG
 O
CYS B:4 G:4 5.0 0.037 S -125.9 158.1 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 CYS C:4 G:4 5.0 0.037 S -99.7 -174.0 5.0 0.037 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 CYS A:4 A:4 1.0 0.007 S -109.8 150.6 1.0 0.007 0.0 HOH
 3.274
 O
 O
CYS B:4 B:4 4.0 0.03 S -112.1 161.1 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 CYS B:4 B:4 7.0 0.052 S -104.2 162.9 7.0 0.052 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 CYS B:4 B:4 6.0 0.044 S -101.5 162.1 6.0 0.044 0.0 HOH
 3.545
 O
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:4 B:4 7.0 0.052 S -103.3 154.1 7.0 0.052 0.0 HOH
 2.673
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:4 B:4 25.0 0.185 S -84.3 149.8 25.0 0.185 0.0
CYS D:4 D:4 8.0 0.059 S -93.9 147.1 NA NA NA
CYS F:4 F:4 7.0 0.052 S -110.1 151.9 NA NA NA
CYS H:4 H:4 19.0 0.141 -96.7 153.5 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 CYS A:5 A:20 8.0 0.059 S -103.6 -85.7 8.0 0.059 0.0
CYS B:5 B:20 3.0 0.022 S -133.7 152.1 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 CYS A:4 A:4 4.0 0.03 S -109.8 154.2 4.0 0.03 0.0 HOH
 3.539
 O
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 CYS D:4 D:4 4.0 0.03 S -97.7 154.5 4.0 0.03 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 CYS A:4 A:4 7.0 0.052 S -88.4 147.0 7.0 0.052 0.0 HOH
 5.070
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 CYS A:20 A:20 8.0 0.059 S -112.3 145.4