Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4835997 . G A CCDS54068.1:NM_000173.5:c.98tGt>tAt_NP_000164.5:p.33C>Y Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 CYS A:17 G:17 0.0 0.0 -115.4 42.0 0.0 0.0 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS D:17 G:17 0.0 0.0 -108.5 27.3 0.0 0.0 0.0 HOH
 6.595
 O
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS A:17 G:17 0.0 0.0 -113.7 25.4 0.0 0.0 0.0 HOH
 6.817
 N
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 CYS A:17 A:17 0.0 0.0 -115.6 39.1 0.0 0.0 0.0 HOH
 7.147
 O
 O
CYS B:17 G:17 0.0 0.0 -102.5 23.4 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 CYS C:17 G:17 0.0 0.0 -108.0 27.0 0.0 0.0 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 CYS A:17 A:17 0.0 0.0 -112.1 17.1 0.0 0.0 0.0 HOH
 5.676
 N
 O
CYS B:17 B:17 0.0 0.0 -118.6 21.1 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 CYS B:17 B:17 0.0 0.0 -125.6 24.4 0.0 0.0 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 CYS B:17 B:17 0.0 0.0 -122.7 33.7 0.0 0.0 0.0 HOH
 6.646
 C
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:17 B:17 0.0 0.0 -112.1 19.7 0.0 0.0 0.0 HOH
 6.509
 N
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:17 B:17 0.0 0.0 -119.1 45.5 0.0 0.0 0.0
CYS D:17 D:17 0.0 0.0 -119.5 35.3 NA NA NA
CYS F:17 F:17 0.0 0.0 -120.8 45.4 NA NA NA
CYS H:17 H:17 0.0 0.0 -121.1 31.5 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 CYS A:18 A:33 0.0 0.0 -134.0 51.2 0.0 0.0 0.0 NAG
 9.636
 O
 N2
CYS B:18 B:33 0.0 0.0 -107.6 27.0 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 CYS A:17 A:17 0.0 0.0 -117.5 37.0 0.0 0.0 0.0 HOH
 6.895
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 CYS D:17 D:17 0.0 0.0 -131.2 -9.1 0.0 0.0 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 CYS A:17 A:17 0.0 0.0 -108.6 26.2 0.0 0.0 0.0 HOH
 6.532
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 CYS A:33 A:33 0.0 0.0 -110.3 17.3