Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836114 . G A CCDS54068.1:NM_000173.5:c.215cGc>cAc_NP_000164.5:p.72R>H Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 ARG A:56 G:56 120.0 0.533 T -99.8 1.5 120.0 0.533 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 ARG D:56 G:56 124.0 0.551 T -115.7 16.6 124.0 0.551 0.0 HOH
 2.780
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 ARG A:56 G:56 142.0 0.631 T -106.6 5.7 142.0 0.631 0.0 HOH
 2.712
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 ARG A:56 A:56 151.0 0.671 T -109.0 4.4 151.0 0.671 0.0
ARG B:56 G:56 119.0 0.529 T -101.7 4.9 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 ARG C:56 G:56 75.0 0.333 T -113.0 21.5 75.0 0.333 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 ARG A:56 A:56 142.0 0.631 T -111.3 6.8 142.0 0.631 0.0 HOH
 2.831
 O
 O
ARG B:56 B:56 143.0 0.636 T -106.0 2.7 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 ARG B:56 B:56 140.0 0.622 T -112.0 -8.4 140.0 0.622 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 ARG B:56 B:56 131.0 0.582 T -118.2 -5.1 131.0 0.582 0.0 HOH
 2.536
 NH2
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 ARG B:56 B:56 136.0 0.604 T -115.1 9.5 136.0 0.604 0.0 HOH
 2.677
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 ARG B:56 B:56 123.0 0.547 T -103.4 -11.4 123.0 0.547 0.0
ARG D:56 D:56 144.0 0.64 T -101.1 -1.0 NA NA NA
ARG F:56 F:56 113.0 0.502 T -103.0 -8.6 NA NA NA
ARG H:56 H:56 139.0 0.618 T -103.9 -11.1 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 ARG A:57 A:72 150.0 0.667 T -93.2 -3.6 150.0 0.667 0.0 HOH
 9.958
 O
 O
ARG B:57 B:72 145.0 0.644 T -101.9 19.0 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 ARG A:56 A:56 111.0 0.493 T -111.6 4.1 111.0 0.493 0.0 HOH
 2.854
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 ARG D:56 D:56 125.0 0.556 T 161.5 16.3 125.0 0.556 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 ARG A:56 A:56 121.0 0.538 T -104.3 4.9 121.0 0.538 0.0 HOH
 2.507
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 ARG A:72 A:72 139.0 0.618 T -103.9 5.2