Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836161 . G A CCDS54068.1:NM_000173.5:c.262Gtc>Atc_NP_000164.5:p.88V>I Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 VAL A:72 G:72 71.0 0.458 -69.8 106.4 71.0 0.458 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 VAL D:72 G:72 41.0 0.265 -85.4 102.1 41.0 0.265 0.0 HOH
 2.596
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 VAL A:72 G:72 44.0 0.284 -105.8 82.9 44.0 0.284 0.0 HOH
 2.891
 N
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 VAL A:72 A:72 48.0 0.31 -116.9 76.0 48.0 0.31 0.0 HOH
 7.606
 CG2
 O
VAL B:72 G:72 45.0 0.29 -105.2 107.3 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 VAL C:72 G:72 40.0 0.258 -80.7 98.5 40.0 0.258 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 VAL A:72 A:72 18.0 0.116 -126.3 116.2 18.0 0.116 0.0 HOH
 2.826
 N
 O
VAL B:72 B:72 36.0 0.232 -113.1 86.4 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 VAL B:72 B:72 35.0 0.226 -122.0 87.0 35.0 0.226 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 VAL B:72 B:72 51.0 0.329 -104.5 87.4 51.0 0.329 0.0 HOH
 3.397
 CB
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:72 B:72 41.0 0.265 -128.9 108.8 41.0 0.265 0.0 HOH
 7.693
 CG2
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:72 B:72 35.0 0.226 -102.3 70.5 35.0 0.226 0.0
VAL D:72 D:72 32.0 0.206 -108.1 27.2 NA NA NA
VAL F:72 F:72 38.0 0.245 -103.6 116.0 NA NA NA
VAL H:72 H:72 26.0 0.168 -111.1 78.7 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 VAL A:73 A:88 21.0 0.135 -99.8 139.2 21.0 0.135 0.0 HOH
 3.530
 CG1
 O
VAL B:73 B:88 45.0 0.29 -78.5 124.5 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 VAL A:72 A:72 37.0 0.239 -120.4 90.1 37.0 0.239 0.0 HOH
 3.277
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 VAL D:72 D:72 47.0 0.303 -94.2 70.9 47.0 0.303 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 VAL A:72 A:72 49.0 0.316 -100.7 24.3 49.0 0.316 0.0 HOH
 3.936
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 VAL A:88 A:88 30.0 0.194 -109.6 89.3